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NECEvent2014_8_4_scaffold_1016

Alias: 178_004_scaffold_1016

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_1016_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(164..793)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H5A0_9CLOT
putative RNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:KJU71789.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_8_4_scaffold_1016_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(825..1613)
DNA (789bp) protein (263aa)
YidC/Oxa1 family membrane protein insertase n=2 Tax=Clostridium butyricum RepID=R0ABZ1_CLOBU
Protein translocase component YidC {ECO:0000313|EMBL:KHD13896.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
yidC; membrane insertase, YidC/Oxa1 family domain protein
NECEvent2014_8_4_scaffold_1016_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1643..1852)
DNA (210bp) protein (70aa)
membrane protein insertion efficiency factor n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=UPI0003B78AB1
putative membrane protein insertion efficiency factor
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
NECEvent2014_8_4_scaffold_1016_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1815..2201)
DNA (387bp) protein (129aa)
rnpA; ribonuclease P protein component RnpA (EC:3.1.26.5)
Ribonuclease P protein component n=4 Tax=Clostridium butyricum RepID=B1QSN0_CLOBU
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
NECEvent2014_8_4_scaffold_1016_5
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2262..2396)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EI53_CLOPA
ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environ
NECEvent2014_8_4_scaffold_1016_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2930..4285
DNA (1356bp) protein (452aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBL2_9CLOT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
dnaA; chromosomal replication initiator protein DnaA
NECEvent2014_8_4_scaffold_1016_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4544..5644
DNA (1101bp) protein (367aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1561 species="Bacteria
dnaN; DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Clostridium colicanis 209318 RepID=N9XW95_9CLOT rbh
NECEvent2014_8_4_scaffold_1016_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5675..5887
DNA (213bp) protein (71aa)
S4 domain protein YaaA n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UW13_CLOBO
S4 domain protein YaaA {ECO:0000313|EMBL:EES50591.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
yaaA; S4 domain-containing protein YaaA
NECEvent2014_8_4_scaffold_1016_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5946..6413
DNA (468bp) protein (156aa)
DNA replication and repair protein recF n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H926_9CLOT
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
recF; DNA replication and repair RecF family protein
Displaying 9 items

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