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NECEvent2014_8_4_scaffold_2_22

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(25211..27001)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator (PAS, AAA-type ATPase, and DNA-binding domain containing protein) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U3G1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 590.0
  • Bit_score: 708
  • Evalue 7.40e-201
  • rbh
Transcriptional regulator (PAS, AAA-type ATPase, and DNA-binding domain containing protein) {ECO:0000313|EMBL:EKQ55052.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 591.0
  • Bit_score: 708
  • Evalue 7.90e-201
sigma-54-dependent transcriptional regulator YgeV similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 585.0
  • Bit_score: 677
  • Evalue 3.90e-192

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Taxonomy

Clostridium sp. Maddingley MBC34-26 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1791
ATGATTAAGTTACGTCTTAAAGATATAAGTAAAGTTGTTAATAGATATGCAAAAGTTATTTCAAGTATTGTAAATATCGATGTTGAGATAGTTGATGAGAATTTAATTAGAATAGCTGGAACTGGATTATATAGTAATAAAGTTAATGAGAGTATAGATAAGGTTGGATATGTTTATAAGCATGCATTAGCTACAGGAGAAATTCAAATTATTAATAATCCAGGAGAAAATGAATTATGTAAAAACTGTGAGCAATGCGGAAATTGTATAGAAGAGATGGAGATATGTGTTCCAATAAAATATAAGGATGAGACATTTGGAATTATTGGATTAATTTGCAGTAGCTATGATCAAAAGAAGAGACTAGAAGGTAATTTAACTAATATGGTATCATTCTTAGAGCAAATTGGGGAGTTAATTGCAGCAAAAATAATTGAAGAGAATGAAGTTGAGTTAAGTCGGTTGAATCTAAGTTTCTTAAAACAAATATTGGATTCTGTTGATAATGGCGTAATACCCATAAAGAGAGATGGTACAATACAAAATATTAATTACTGTGGATTAAAAGAACTAAAACTGAGCCCAAGTGTAATAGGTAAAAATATAGAAATTACCGAGGTAGAGGAGTATTATCACGGAAATAGAACTTTTAAAATAAGAATTGAAGAAAAAGAATTTAATGTTGTTGGCAAGCTTATTCCCAATGTAGTTGGCATAGATGAATGTGATAAGATATTGATATTTAATAAGTTACATAAGTTACAAGAGGATGCCTTAAATATTTCTTTAGGGGATAATAAAACAAATACGAAGTCAATTTTAGGAGAATCAAAAGCAATAAAATCATTAAAAAATAAAGTTAAAAGAATAGCAGATTCAAAATCTACTGTATTAATAACTGGAGAAAGTGGAACAGGAAAAGAATTAGTGGCAAGAGCTATTCATTCAGAAAGCGATAGAAAAAATAAACCATTTATAGCAATTAACTGTGGAGCAATTCCTGAAACTCTTCTTGAAAGTGAATTGTTTGGATATGTTAAAGGTGCTTTTTCAGGGGCAAGTTCTAGTGGAAGAATAGGTAAGTTTGAGTTAGCAAATAAAGGTGTAATATTTTTAGATGAAATAGGAGACATGCCTTTATATCTCCAAGTAAAGTTATTGAGGGTATTGCAAGAAAGAGTAGTTGTTAGAATTGGGTCAAATCAATTACAACACTTGGATATAAGAGTTATAGCTGCAACTAATAAAAATCTAAAAGAACTTGTAAAGGAAGGAAAGTTCAGAGAGGATTTATATTATAGGCTTAATGTAATTCCTATAGAGGTACCTCCCCTTAGAGATAGGGAAGATGATATAGATATTATTACAAAGGGATTATTAAATAAATATAACCAAATTTATAATAAATATGTTCATACAATTGATGATGACGTGAGAAATATGATGCATAAATATAGTTGGCCAGGAAATATACGAGAATTAGAAAATGTTGTTGAGTTTATGGTAAGTCTTTCTAATGAAAGTGGAATAGTAAAGAGAAGTATGCTACCTAAATCCTTTGTTGATGCATATCAAGAAGAAAAGGATAAAAATAAATTTAGTTTTTTAGAGAATAATGAAATAAGAACATTAAAGGATATTGAAAAGCAGTATATAACTAAGGTTTTGGAGGAATATGGTTACGATACAGAAGGAAAGAAAAAAGCTGCAAAAAAATTAGGTATTGGACTAGCTACACTTTATAGAAAGCTAGATGATATGAAATGATTATCATTTTGAGAAAAAGTATAG
PROTEIN sequence
Length: 597
MIKLRLKDISKVVNRYAKVISSIVNIDVEIVDENLIRIAGTGLYSNKVNESIDKVGYVYKHALATGEIQIINNPGENELCKNCEQCGNCIEEMEICVPIKYKDETFGIIGLICSSYDQKKRLEGNLTNMVSFLEQIGELIAAKIIEENEVELSRLNLSFLKQILDSVDNGVIPIKRDGTIQNINYCGLKELKLSPSVIGKNIEITEVEEYYHGNRTFKIRIEEKEFNVVGKLIPNVVGIDECDKILIFNKLHKLQEDALNISLGDNKTNTKSILGESKAIKSLKNKVKRIADSKSTVLITGESGTGKELVARAIHSESDRKNKPFIAINCGAIPETLLESELFGYVKGAFSGASSSGRIGKFELANKGVIFLDEIGDMPLYLQVKLLRVLQERVVVRIGSNQLQHLDIRVIAATNKNLKELVKEGKFREDLYYRLNVIPIEVPPLRDREDDIDIITKGLLNKYNQIYNKYVHTIDDDVRNMMHKYSWPGNIRELENVVEFMVSLSNESGIVKRSMLPKSFVDAYQEEKDKNKFSFLENNEIRTLKDIEKQYITKVLEEYGYDTEGKKKAAKKLGIGLATLYRKLDDMK*LSF*EKV*