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NECEvent2014_8_4_scaffold_5_49

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(53476..54444)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 320.0
  • Bit_score: 515
  • Evalue 4.10e-143
Pseudouridine synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EMC4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 322.0
  • Bit_score: 516
  • Evalue 1.70e-143
  • rbh
pseudouridine synthase, RluA family protein similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 324.0
  • Bit_score: 502
  • Evalue 1.20e-139

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Taxonomy

Clostridium chauvoei → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 969
TTGAAAATTGAAATAGGATATAATGAAGCAGGGCAAAGATTAGATAAATTTTTAAGAAAATTGTTAAAGGATGTTCCTTTAAGTGCAATTTTTAAAGCAATTAGAAAAGGTGACATAAGAGTAAACGGAAAGAAACAAAAGGAAAAATATTCATTACTTGAAGGTGATGAAGTTGAAATTAGATACATACAAAGTAAGAAGGAAAATAAAACCAACTTTATCCAAGTTGATTCATCAGGATTGAAAGTTGTATATGAGGATGAAAATGTTTTAATAGTAGAAAAGTGGCCAGGAGTGTTAGTTCATCCAGATAGTAAGGGAAGTGAAGCTACATTAACAGATTATGTACTTTCGTATCTAAACGAAAAGGGTGACTATAGACCAGAAGAAGAGATAACTTTCACACCAGCATCTTGCAATAGATTAGATAGAAATACTTCAGGTGTAGTTATTTTTGGTAAGAACTTTGAAGCTTTAAAGACTTTAAATGAAGTAGTTAGAGAAGGTCAAGTTAAGAAATACTATTATACTTTGGTTAAAGGAAAGCTAAAGGATGGCGTATATAAAGGGTACATATTAAAGAATGAAGAAGCCAATATTTCAAGAGTATTTGATAAACAAGTTTCAAATTCTAAAGAAATATCTATGGAAGTTAAAACTGTTCAAACAAATGGGGCCTTCTCACTATTAGAAATTGATCTTATAACAGGAAGAAGTCATCAAATTAGAGCACACTTAGCTCATTTAGGAAATCCAGTTATAGGAGATAGTAAATATGGGGATAAGGAACTTAACTCATTCTTTAACAATAAGTTTGGATTAAATTATCAGTTCCTTTATGCATATAAGCTTATATTTAGAGAAGTTGGAGGCAAGTTATCTTATTTAAAGAACAAAACAATAGCAGCTGCTTTACCTCCAATATTTAAGAAAATAAAAAGTGATGTGTTTAAATTTTCTATAAGATAG
PROTEIN sequence
Length: 323
LKIEIGYNEAGQRLDKFLRKLLKDVPLSAIFKAIRKGDIRVNGKKQKEKYSLLEGDEVEIRYIQSKKENKTNFIQVDSSGLKVVYEDENVLIVEKWPGVLVHPDSKGSEATLTDYVLSYLNEKGDYRPEEEITFTPASCNRLDRNTSGVVIFGKNFEALKTLNEVVREGQVKKYYYTLVKGKLKDGVYKGYILKNEEANISRVFDKQVSNSKEISMEVKTVQTNGAFSLLEIDLITGRSHQIRAHLAHLGNPVIGDSKYGDKELNSFFNNKFGLNYQFLYAYKLIFREVGGKLSYLKNKTIAAALPPIFKKIKSDVFKFSIR*