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NECEvent2014_8_4_scaffold_76_30

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(27831..28706)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) s similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 291.0
  • Bit_score: 411
  • Evalue 1.30e-111
truB; tRNA pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 291.0
  • Bit_score: 410
  • Evalue 4.40e-112
tRNA pseudouridine synthase B n=1 Tax=Clostridium sp. DL-VIII RepID=G7LYK4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 291.0
  • Bit_score: 411
  • Evalue 9.10e-112

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Taxonomy

Clostridium sp. DL-VIII → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 876
ATGAATGGTGTATTAAATATATTTAAAAATTCAGGAATGTCATCTTTTGATGTTGTAAGAATTGTAAGAAAAGTTGCTTGTGAGAAAAAAGTTGGACATACAGGCACTCTTGATCCAGAAGCAATTGGTGTCTTACCAGTATGTTTAGGAAAGGCAACCAAGATAATAGATTACATTATGAATGATAAGAAGAGCTACAAGGTGAAATTTAAGCTTGGAGTTACTACAACTACATATGATTTAGAAGGTGAAATATTATCAGAAAGTGACACTTCTAATATTACAGTTGAAGAGACACTAGAAGCTATAAATAAATTTAAAGGAACATATAATCAAGTTCCACCTATGTATTCTGCCCTAAAGAAAAATGGAGTAAGGCTATATGAACTTGCAAGAAAAGGAATAGAAGTAGAGAGAGAAGGAAGACCCATAACTATATATGACATTAAAGATATAGAAATTAATCTTCCTTATATATCTATGGAAGTAACTTGTTCTAAGGGGACGTATATAAGAAGCCTTTGCTATGATATAGGTGAAGCATTAAAAGTAGGGGCTTGTATGACAGACCTTAGAAGAACTGAAACATCTTGTTTTCATGAAAGAGATAGCATTAATATTAAGGATTTAACTAGTGAGAACATACATAATTATATTATATCAATAGAGGATGCATTAAAATTCTATCCTAAACTTAAAGTTAATGAAGGCTTTAGCAAGTTACTTATAAATGGTGTTAGAGTAATGGATAGAAGATTAACAAATGAAAAAATAGACAATAATATTCTATATAGAGTTTATGATGAAAATGATAAATTTTTAGGTCTTGGGAAAAGAGAACTTAACGGATTTAAAATTGAAAAACTATTAATATAG
PROTEIN sequence
Length: 292
MNGVLNIFKNSGMSSFDVVRIVRKVACEKKVGHTGTLDPEAIGVLPVCLGKATKIIDYIMNDKKSYKVKFKLGVTTTTYDLEGEILSESDTSNITVEETLEAINKFKGTYNQVPPMYSALKKNGVRLYELARKGIEVEREGRPITIYDIKDIEINLPYISMEVTCSKGTYIRSLCYDIGEALKVGACMTDLRRTETSCFHERDSINIKDLTSENIHNYIISIEDALKFYPKLKVNEGFSKLLINGVRVMDRRLTNEKIDNNILYRVYDENDKFLGLGKRELNGFKIEKLLI*