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NECEvent2014_8_4_scaffold_220_20

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(15988..17295)

Top 3 Functional Annotations

Value Algorithm Source
ydhO3; PTS system, cellobiose-specific IIC component (EC:2.7.1.69) similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 424.0
  • Bit_score: 538
  • Evalue 2.10e-150
PTS system, cellobiose-specific IIC component n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJM7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 435.0
  • Bit_score: 647
  • Evalue 8.60e-183
  • rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 432.0
  • Bit_score: 759
  • Evalue 2.20e-216

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1308
ATGAATAAATTTACGTCTTTAATTGAAGAAAAGTTATTACCCATTGCAGGAAAATTAGCTTCTAGTAGAATATTGTCTGTATTACGTGATGCATTTATGCTAAGTTTTCCATTAACTATCGTTGGTTCACTTGCAGTAGTAGTTATGAATTTGCCTTATTTGGACAAGCTTATAGGAGCAGATGGCGTTGCAGCAATTAATAATATTTTTGGTATATTACCTTCGGCTACTATGAGTATAGCTACATTGTTTGTGGTAATAGGTATAGGATATTATTTAGCTAAAAGCTATGATGTAGATGCAATATTTGCAGCAGGTGTAGCGGTTGCAGCATTCTTAGTATTAACTCCACTTACTGTTACTGCGGATAATGGAACAGTAATTAATGATGTAATTCCAATTGCTAGATTAGGGGCAAAAGGAATGTTTGTAGGTATTATAGGATCCTTTATATCGACAAGAGTTTATGTTTGGGCAATTAAAAGAAATTGGACAATTAAGATGCCAGATGGAGTGCCACCAACAGTTGCAAAATCATTTGCTGCATTAATTCCTGGATGTATTGTAATCGGTTTATTCTTAGTTATAAGAACTATTTTCACTTATACACCATGGGGAAATATACATGATTGTATATATGAAATAATTCAAATGCCATTAATATCATTAGGTAGTGGACTTCTAGCAACTTTAGTTGCAATATTTGCAATTCAAATATTATGGTTCTTTGGATTACACGGTCAAATAATTGTAAATTCAGTATTAGATCCAATTTGGAATACTTTGTCATTAGAAAACTATGAGGCGTTTGTAGCTGGAACAGATATTCCTAATGTAATTACAAAACAATTTATTGAAACATTTACTGTTGGAATGGGTGGTACAGGTATGACCCTAGCAGTAATAGTTGGAATATTTATATTCTGTAAGAGTAGACAAATGAGAGAAGTGGCAAAACTTGCTGCACCATCAGGAGTTTTTAATGTTAATGAACCAATAATATTTGGTTTGCCAATAGTAATGAATCCAACAATTTTAATTCCTTGGGTTATAGCACCAATGTTAGTTGTAGCGGTGTCTTATTTTGCAATGAAGACAGGATTAGTTCCAAAAACAACAGGTGTTGCTGTACCTTGGACAGTTCCAATGTTCTTTAGTGGAATTTTAGCAACAAACTCATTAAGAGGGGGATTATTGCAAATAGTTAACTTTGCCATAGTATTTGTTACATGGATGCCATTTATAAAATCATTAGATAGATTTACAATCAAAAATGAAGAAAAATTAAAAGCTGAAGAAATAAATTAA
PROTEIN sequence
Length: 436
MNKFTSLIEEKLLPIAGKLASSRILSVLRDAFMLSFPLTIVGSLAVVVMNLPYLDKLIGADGVAAINNIFGILPSATMSIATLFVVIGIGYYLAKSYDVDAIFAAGVAVAAFLVLTPLTVTADNGTVINDVIPIARLGAKGMFVGIIGSFISTRVYVWAIKRNWTIKMPDGVPPTVAKSFAALIPGCIVIGLFLVIRTIFTYTPWGNIHDCIYEIIQMPLISLGSGLLATLVAIFAIQILWFFGLHGQIIVNSVLDPIWNTLSLENYEAFVAGTDIPNVITKQFIETFTVGMGGTGMTLAVIVGIFIFCKSRQMREVAKLAAPSGVFNVNEPIIFGLPIVMNPTILIPWVIAPMLVVAVSYFAMKTGLVPKTTGVAVPWTVPMFFSGILATNSLRGGLLQIVNFAIVFVTWMPFIKSLDRFTIKNEEKLKAEEIN*