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NECEvent2014_8_4_scaffold_220

Alias: 178_004_scaffold_220

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_220_1
unknown

Not on your lists

comp(3..131)
DNA (129bp) protein (43aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_220_2
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(134..490)
DNA (357bp) protein (119aa)
6-pyruvoyl-tetrahydropterin synthase related protein n=3 Tax=Clostridium acetobutylicum RepID=F0KCU2_CLOAE
6-pyruvoyl tetrahydrobiopterin synthase
6-pyruvoyl-tetrahydropterin synthase related protein {ECO:0000313|EMBL:AAK80479.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
NECEvent2014_8_4_scaffold_220_3
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(503..2110)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IXP0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDE56419.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_8_4_scaffold_220_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2345..2620
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q6D6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY23280.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
NECEvent2014_8_4_scaffold_220_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2613..2861
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q5W0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY23281.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
cotJB family protein
NECEvent2014_8_4_scaffold_220_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2876..3454
DNA (579bp) protein (193aa)
CotJC protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q6Q3_9CLOT rbh
CotJC protein {ECO:0000313|EMBL:EKY23282.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
manganese containing catalase family protein
NECEvent2014_8_4_scaffold_220_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3495..3875)
DNA (381bp) protein (127aa)
Putative endoribonuclease L-PSP n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3G6_9CLOT
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EEH98472.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;
endoribonuclease L-PSP
NECEvent2014_8_4_scaffold_220_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3895..5115)
DNA (1221bp) protein (407aa)
ilvA; L-threonine dehydratase biosynthetic IlvA (EC:4.3.1.19)
UPI0003D5CC56 related cluster n=1 Tax=unknown RepID=UPI0003D5CC56
Threonine dehydratase {ECO:0000313|EMBL:ETI90060.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_8_4_scaffold_220_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5272..6630)
DNA (1359bp) protein (453aa)
FAD/FMN-dependent dehydrogenase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U4Y0_9CLOT rbh
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EKQ56596.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley
berberine and berberine like family protein
NECEvent2014_8_4_scaffold_220_10
unknown

Not on your lists

comp(6623..7132)
DNA (510bp) protein (170aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_220_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7167..7724)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V122_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08888.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_8_4_scaffold_220_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7849..8364
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000371F9D0
NAD(P)H nitroreductase {ECO:0000313|EMBL:KJU72605.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
nitroreductase family protein
NECEvent2014_8_4_scaffold_220_13
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8383..10596)
DNA (2214bp) protein (738aa)
ATP-dependent Clp proteinase n=1 Tax=Clostridium sp. CAG:411 RepID=R7HZ09_9CLOT rbh
ATP-dependent Clp proteinase {ECO:0000313|EMBL:CDE44934.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostr
clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
NECEvent2014_8_4_scaffold_220_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10608..10907)
DNA (300bp) protein (100aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EYX7_9CLOT
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
hypothetical protein
NECEvent2014_8_4_scaffold_220_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11083..11970)
DNA (888bp) protein (296aa)
glucokinase (EC:2.7.1.2)
ROK family protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUL4_CLOBO rbh
ROK family protein {ECO:0000313|EMBL:EES49834.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Be
NECEvent2014_8_4_scaffold_220_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11984..12919)
DNA (936bp) protein (312aa)
manA; mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:AIY81248.1}; EC=5.3.1.8 {ECO:0000313|EMBL:AIY81248.1};; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
mannose-6-phosphate isomerase n=1 Tax=Clostridium botulinum RepID=UPI000365B9BD rbh
NECEvent2014_8_4_scaffold_220_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12932..13831)
DNA (900bp) protein (300aa)
ROK family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJJ5_9CLOT rbh
ROK family protein {ECO:0000313|EMBL:EKY28148.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
transcriptional regulator/sugar kinase
NECEvent2014_8_4_scaffold_220_18
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13849..14520)
DNA (672bp) protein (224aa)
G-D-S-L family lipolytic protein n=1 Tax=Clostridium intestinale URNW RepID=U2N923_9CLOT
G-D-S-L family lipolytic protein {ECO:0000313|EMBL:ERK32007.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale U
hypothetical protein
NECEvent2014_8_4_scaffold_220_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14568..15956)
DNA (1389bp) protein (463aa)
aryl-phospho-beta-glucosidase (EC:3.2.1.86)
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T9E6_9CLOT
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KJU72699.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_8_4_scaffold_220_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15988..17295)
DNA (1308bp) protein (436aa)
ydhO3; PTS system, cellobiose-specific IIC component (EC:2.7.1.69)
PTS system, cellobiose-specific IIC component n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJM7_9CLOT rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_8_4_scaffold_220_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17471..18181)
DNA (711bp) protein (237aa)
GntR family transcriptional regulator n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G4S6_CLOPA
GntR family transcriptional regulator {ECO:0000313|EMBL:KJU72697.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
GntR family transcriptional regulator
NECEvent2014_8_4_scaffold_220_22
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18352..18912)
DNA (561bp) protein (187aa)
antibiotic resistance protein VanZ n=1 Tax=Desulfitobacterium hafniense RepID=UPI000378961A
VanZ-like protein {ECO:0000313|EMBL:CDX02950.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desul
VanZ family protein
NECEvent2014_8_4_scaffold_220_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18914..20167)
DNA (1254bp) protein (418aa)
Stage V sporulation protein E n=2 Tax=Clostridium botulinum B RepID=U4PMT8_CLOBO
Cell cycle family protein {ECO:0000313|EMBL:AIY79472.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
NECEvent2014_8_4_scaffold_220_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20158..20577)
DNA (420bp) protein (140aa)
Lineage-specific thermal regulator protein n=2 Tax=Clostridium botulinum B RepID=B2TNP2_CLOBB
lineage-specific thermal regulator protein
Lineage-specific thermal regulator protein {ECO:0000313|EMBL:ACD21796.1}; Transcriptional regulator, PadR family {ECO:0000313|EMBL:CDH91567.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia;
NECEvent2014_8_4_scaffold_220_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20587..20907)
DNA (321bp) protein (107aa)
RNA polymerase sigma factor n=2 Tax=Clostridium botulinum B RepID=B2TNP3_CLOBB
RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:AIY80440.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
Displaying 25 items

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