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NECEvent2014_8_4_Streptococcus_HSISS3-rel_41_5

NECEvent2014_8_4_Streptococcus_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Description

May include other low abundance Strep.

Displaying items 551-600 of 676 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_3020 178_004_scaffold_3020
Species: Streptococcus sp. HSISS3 (100%)
2 2093 bp 40.71 4.01 85.71
NECEvent2014_8_4_scaffold_2708 178_004_scaffold_2708
Species: Streptococcus mitis (66.67%)
3 2407 bp 42.00 3.99 96.22
NECEvent2014_8_4_scaffold_5475 178_004_scaffold_5475
Species: Streptococcus oralis (100%)
1 1054 bp 34.35 3.98 99.62
NECEvent2014_8_4_scaffold_2455 178_004_scaffold_2455
Species: Streptococcus salivarius (50%)
4 2677 bp 42.10 3.98 99.85
NECEvent2014_8_4_scaffold_5643 178_004_scaffold_5643
Species: Streptococcus mitis (100%)
2 1018 bp 36.25 3.98 52.16
NECEvent2014_8_4_scaffold_4650 178_004_scaffold_4650
Species: Streptococcus salivarius (50%)
2 1283 bp 36.94 3.98 62.90
NECEvent2014_8_4_scaffold_5448 178_004_scaffold_5448
Species: Streptococcus sp. HSISS3 (100%)
1 1059 bp 44.19 3.97 99.72
NECEvent2014_8_4_scaffold_3799 178_004_scaffold_3799
Species: Streptococcus pneumoniae (100%)
2 1625 bp 40.25 3.97 92.86
NECEvent2014_8_4_scaffold_3724 178_004_scaffold_3724
Species: Streptococcus pneumoniae (100%)
3 1666 bp 33.31 3.96 94.54
NECEvent2014_8_4_scaffold_4871 178_004_scaffold_4871
Species: Streptococcus sp. C150 (66.67%)
3 1216 bp 41.94 3.95 89.31
NECEvent2014_8_4_scaffold_4621 178_004_scaffold_4621
Species: Streptococcus sp. C150 (100%)
1 1290 bp 38.99 3.95 99.77
NECEvent2014_8_4_scaffold_4744 178_004_scaffold_4744
Species: Streptococcus sp. HSISS3 (100%)
1 1257 bp 44.39 3.94 99.76
NECEvent2014_8_4_scaffold_4862 178_004_scaffold_4862
Species: Streptococcus oligofermentans (50%)
2 1217 bp 39.93 3.94 90.71
NECEvent2014_8_4_scaffold_5135 178_004_scaffold_5135
Species: Streptococcus sp. HSISS2 (100%)
1 1141 bp 34.62 3.94 99.65
NECEvent2014_8_4_scaffold_3688 178_004_scaffold_3688
Species: Streptococcus sp. M334 (50%)
2 1684 bp 36.94 3.92 88.84
NECEvent2014_8_4_scaffold_4832 178_004_scaffold_4832
Species: Streptococcus sp. HSISS2 (100%)
1 1227 bp 32.27 3.91 99.76
NECEvent2014_8_4_scaffold_4837 178_004_scaffold_4837
Species: Streptococcus sp. ACS2 (50%)
2 1227 bp 41.56 3.91 87.78
NECEvent2014_8_4_scaffold_4566 178_004_scaffold_4566
Species: Streptococcus mitis (50%)
4 1308 bp 38.69 3.90 89.22
NECEvent2014_8_4_scaffold_5089 178_004_scaffold_5089
Species: Streptococcus sp. HSISS2 (100%)
1 1155 bp 32.38 3.90 76.36
NECEvent2014_8_4_scaffold_3188 178_004_scaffold_3188
Species: Streptococcus sp. HSISS3 (100%)
2 1968 bp 42.12 3.89 90.70
NECEvent2014_8_4_scaffold_2432 178_004_scaffold_2432
Species: Streptococcus sanguinis (50%)
2 2704 bp 35.32 3.88 99.30
NECEvent2014_8_4_scaffold_5347 178_004_scaffold_5347
Species: Streptococcus sp. HSISS3 (66.67%)
3 1082 bp 39.93 3.88 95.38
NECEvent2014_8_4_scaffold_5348 178_004_scaffold_5348
Species: Streptococcus mitis (50%)
2 1082 bp 43.62 3.88 90.11
NECEvent2014_8_4_scaffold_4073 178_004_scaffold_4073
Species: Streptococcus mitis (100%)
2 1507 bp 40.01 3.88 93.76
NECEvent2014_8_4_scaffold_2292 178_004_scaffold_2292
Species: Streptococcus sp. HSISS3 (75%)
4 2861 bp 33.80 3.88 90.28
NECEvent2014_8_4_scaffold_4347 178_004_scaffold_4347
Species: Streptococcus salivarius (50%)
2 1391 bp 42.27 3.88 81.96
NECEvent2014_8_4_scaffold_3124 178_004_scaffold_3124
Species: Streptococcus salivarius (50%)
2 2009 bp 39.62 3.88 88.55
NECEvent2014_8_4_scaffold_4800 178_004_scaffold_4800
Species: Streptococcus salivarius (100%)
2 1239 bp 42.21 3.87 86.92
NECEvent2014_8_4_scaffold_5336 178_004_scaffold_5336
Species: Streptococcus sp. HSISS3 (50%)
2 1085 bp 42.21 3.87 98.99
NECEvent2014_8_4_scaffold_4780 178_004_scaffold_4780
Species: Streptococcus sp. HSISS2 (66.67%)
3 1246 bp 40.21 3.85 100.16
NECEvent2014_8_4_scaffold_5662 178_004_scaffold_5662
Species: Streptococcus sp. ACS2 (100%)
1 1012 bp 34.29 3.85 81.23
NECEvent2014_8_4_scaffold_5469 178_004_scaffold_5469
Species: Streptococcus sp. HSISS1 (100%)
2 1056 bp 47.06 3.84 100.00
NECEvent2014_8_4_scaffold_5471 178_004_scaffold_5471
Species: Streptococcus sp. C150 (50%)
2 1056 bp 42.33 3.84 59.09
NECEvent2014_8_4_scaffold_4497 178_004_scaffold_4497
Species: Streptococcus sp. HSISS2 (100%)
1 1333 bp 39.16 3.83 70.22
NECEvent2014_8_4_scaffold_3523 178_004_scaffold_3523
Species: Streptococcus sp. BS29a (50%)
2 1761 bp 33.79 3.83 80.07
NECEvent2014_8_4_scaffold_3083 178_004_scaffold_3083
Species: Streptococcus mitis (100%)
1 2037 bp 38.49 3.83 100.00
NECEvent2014_8_4_scaffold_3379 178_004_scaffold_3379
Species: Streptococcus sp. HSISS2 (50%)
2 1844 bp 36.23 3.82 92.90
NECEvent2014_8_4_scaffold_5123 178_004_scaffold_5123
Species: Streptococcus sp. C150 (100%)
2 1143 bp 36.57 3.81 99.21
NECEvent2014_8_4_scaffold_3985 178_004_scaffold_3985
Species: Streptococcus mitis (100%)
1 1541 bp 43.09 3.80 91.30
NECEvent2014_8_4_scaffold_3743 178_004_scaffold_3743
Species: Streptococcus mitis (100%)
2 1659 bp 37.85 3.80 58.59
NECEvent2014_8_4_scaffold_4974 178_004_scaffold_4974
Species: Streptococcus sp. HSISS2 (50%)
2 1187 bp 40.69 3.79 101.10
NECEvent2014_8_4_scaffold_2760 178_004_scaffold_2760
Species: Streptococcus sp. HSISS3 (66.67%)
3 2345 bp 38.81 3.77 89.81
NECEvent2014_8_4_scaffold_1664 178_004_scaffold_1664
Species: Streptococcus sp. HSISS2 (50%)
6 3837 bp 38.96 3.75 91.40
NECEvent2014_8_4_scaffold_3520 178_004_scaffold_3520
Species: Streptococcus parasanguinis (100%)
1 1762 bp 41.32 3.75 92.28
NECEvent2014_8_4_scaffold_3524 178_004_scaffold_3524
Species: Streptococcus salivarius (50%)
2 1761 bp 35.43 3.75 96.59
NECEvent2014_8_4_scaffold_2744 178_004_scaffold_2744
Species: Streptococcus mitis (100%)
3 2364 bp 40.91 3.74 81.47
NECEvent2014_8_4_scaffold_1784 178_004_scaffold_1784
Species: Streptococcus sp. C150 (66.67%)
3 3607 bp 39.78 3.74 96.06
NECEvent2014_8_4_scaffold_4200 178_004_scaffold_4200
Species: Streptococcus mitis (100%)
2 1447 bp 40.36 3.73 87.91
NECEvent2014_8_4_scaffold_2932 178_004_scaffold_2932
Species: Streptococcus oralis (100%)
1 2174 bp 37.35 3.73 99.91
NECEvent2014_8_4_scaffold_4630 178_004_scaffold_4630
Species: Streptococcus sp. C150 (50%)
2 1288 bp 39.67 3.73 71.97
Displaying items 551-600 of 676 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.