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NECEvent2014_8_4_Streptococcus_HSISS3-rel_41_5

NECEvent2014_8_4_Streptococcus_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Description

May include other low abundance Strep.

Displaying items 651-676 of 676 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_4067 178_004_scaffold_4067
Species: Streptococcus sp. HSISS3 (50%)
2 1509 bp 38.90 3.28 68.59
NECEvent2014_8_4_scaffold_4659 178_004_scaffold_4659
Species: Streptococcus sp. HSISS3 (100%)
1 1280 bp 30.78 3.28 99.84
NECEvent2014_8_4_scaffold_3557 178_004_scaffold_3557
Species: Streptococcus salivarius (100%)
2 1750 bp 41.31 3.26 77.49
NECEvent2014_8_4_scaffold_4903 178_004_scaffold_4903
Species: Streptococcus mitis (50%)
2 1205 bp 36.68 3.24 72.95
NECEvent2014_8_4_scaffold_2784 178_004_scaffold_2784
Species: Streptococcus sp. BS35b (50%)
2 2326 bp 39.29 3.22 94.67
NECEvent2014_8_4_scaffold_5603 178_004_scaffold_5603
Species: Streptococcus salivarius (50%)
2 1029 bp 41.89 3.21 99.71
NECEvent2014_8_4_scaffold_5191 178_004_scaffold_5191
Genus: Streptococcus (100%)
3 1125 bp 39.11 3.20 86.40
NECEvent2014_8_4_scaffold_5596 178_004_scaffold_5596
Species: Streptococcus oralis (100%)
1 1030 bp 35.92 3.20 88.54
NECEvent2014_8_4_scaffold_5526 178_004_scaffold_5526
Species: Streptococcus sp. HSISS3 (50%)
2 1044 bp 39.75 3.16 81.90
NECEvent2014_8_4_scaffold_4045 178_004_scaffold_4045
Species: Streptococcus sp. HSISS3 (50%)
2 1521 bp 39.71 3.16 82.45
NECEvent2014_8_4_scaffold_4477 178_004_scaffold_4477
Species: Streptococcus sp. HSISS3 (50%)
2 1339 bp 40.78 3.14 91.41
NECEvent2014_8_4_scaffold_4436 178_004_scaffold_4436
Species: Streptococcus salivarius (50%)
2 1356 bp 40.49 3.10 81.86
NECEvent2014_8_4_scaffold_3574 178_004_scaffold_3574
Species: Streptococcus salivarius (50%)
2 1742 bp 38.35 3.10 79.39
NECEvent2014_8_4_scaffold_4689 178_004_scaffold_4689
Species: Streptococcus sp. HSISS3 (66.67%)
3 1270 bp 34.41 3.07 88.11
NECEvent2014_8_4_scaffold_5570 178_004_scaffold_5570
Species: Streptococcus mitis (50%)
2 1034 bp 39.07 3.05 81.24
NECEvent2014_8_4_scaffold_4339 178_004_scaffold_4339
Species: Streptococcus sp. HSISS2 (50%)
2 1394 bp 38.88 3.01 94.05
NECEvent2014_8_4_scaffold_5230 178_004_scaffold_5230
Species: Streptococcus sp. HSISS3 (50%)
2 1116 bp 36.38 2.96 95.70
NECEvent2014_8_4_scaffold_4660 178_004_scaffold_4660
Species: Streptococcus sp. HSISS3 (50%)
2 1280 bp 41.17 2.93 78.28
NECEvent2014_8_4_scaffold_4341 178_004_scaffold_4341
Species: Streptococcus salivarius (100%)
2 1394 bp 41.68 2.91 75.11
NECEvent2014_8_4_scaffold_4807 178_004_scaffold_4807
Species: Streptococcus sp. HSISS3 (100%)
1 1237 bp 33.87 2.79 98.22
NECEvent2014_8_4_scaffold_4959 178_004_scaffold_4959
Species: Streptococcus salivarius (100%)
1 1191 bp 38.20 2.77 83.38
NECEvent2014_8_4_scaffold_4298 178_004_scaffold_4298
Species: Streptococcus mitis (100%)
1 1407 bp 39.73 2.77 99.79
NECEvent2014_8_4_scaffold_4018 178_004_scaffold_4018
Species: Streptococcus mitis (50%)
2 1529 bp 34.73 2.75 96.53
NECEvent2014_8_4_scaffold_5483 178_004_scaffold_5483
Species: Streptococcus sp. HSISS3 (100%)
1 1053 bp 45.87 2.71 100.00
NECEvent2014_8_4_scaffold_4206 178_004_scaffold_4206
Species: Streptococcus sp. HSISS2 (100%)
1 1445 bp 44.78 2.70 89.69
NECEvent2014_8_4_scaffold_5163 178_004_scaffold_5163
Species: Streptococcus vestibularis (50%)
2 1132 bp 35.69 2.65 48.76
Displaying items 651-676 of 676 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.