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NECEvent2014_8_4_Streptococcus_HSISS3-rel_41_5

NECEvent2014_8_4_Streptococcus_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Description

May include other low abundance Strep.

Displaying items 351-400 of 676 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_4901 178_004_scaffold_4901
Species: Streptococcus mitis (50%)
2 1206 bp 44.53 4.85 101.49
NECEvent2014_8_4_scaffold_5113 178_004_scaffold_5113
Species: Streptococcus sp. C150 (100%)
1 1146 bp 39.53 4.84 96.07
NECEvent2014_8_4_scaffold_4794 178_004_scaffold_4794
Species: Streptococcus mitis (50%)
2 1242 bp 44.12 4.83 99.76
NECEvent2014_8_4_scaffold_4040 178_004_scaffold_4040
Species: Streptococcus sp. HSISS3 (100%)
2 1522 bp 40.47 4.83 66.62
NECEvent2014_8_4_scaffold_5330 178_004_scaffold_5330
Species: Streptococcus oralis (100%)
2 1086 bp 42.08 4.83 99.72
NECEvent2014_8_4_scaffold_4579 178_004_scaffold_4579
Species: Streptococcus salivarius (100%)
2 1303 bp 38.45 4.83 99.92
NECEvent2014_8_4_scaffold_3701 178_004_scaffold_3701
Species: Streptococcus sp. HSISS2 (100%)
1 1679 bp 39.19 4.82 91.48
NECEvent2014_8_4_scaffold_3293 178_004_scaffold_3293
Genus: Streptococcus (100%)
3 1897 bp 41.64 4.82 98.05
NECEvent2014_8_4_scaffold_3345 178_004_scaffold_3345
Species: Streptococcus sp. C150 (50%)
2 1866 bp 36.39 4.82 88.91
NECEvent2014_8_4_scaffold_3753 178_004_scaffold_3753
Species: Streptococcus mitis (100%)
1 1653 bp 40.59 4.81 99.82
NECEvent2014_8_4_scaffold_2738 178_004_scaffold_2738
Species: Streptococcus vestibularis (50%)
4 2371 bp 42.43 4.81 95.40
NECEvent2014_8_4_scaffold_2705 178_004_scaffold_2705
Species: Streptococcus salivarius (100%)
1 2408 bp 44.98 4.80 99.92
NECEvent2014_8_4_scaffold_3556 178_004_scaffold_3556
Species: Streptococcus pneumoniae (100%)
1 1750 bp 42.57 4.80 99.94
NECEvent2014_8_4_scaffold_2824 178_004_scaffold_2824
Species: Streptococcus sp. M334 (100%)
1 2282 bp 42.86 4.80 98.99
NECEvent2014_8_4_scaffold_3430 178_004_scaffold_3430
Species: Streptococcus sp. C150 (100%)
1 1815 bp 39.28 4.79 98.84
NECEvent2014_8_4_scaffold_3054 178_004_scaffold_3054
Species: Streptococcus sp. HSISS3 (100%)
1 2066 bp 44.58 4.79 94.24
NECEvent2014_8_4_scaffold_4748 178_004_scaffold_4748
Species: Streptococcus mitis (50%)
2 1255 bp 45.98 4.78 99.68
NECEvent2014_8_4_scaffold_3009 178_004_scaffold_3009
Species: Streptococcus mitis (66.67%)
6 2104 bp 39.59 4.78 86.98
NECEvent2014_8_4_scaffold_3516 178_004_scaffold_3516
Species: Streptococcus sp. SR4 (50%)
2 1762 bp 43.02 4.77 87.34
NECEvent2014_8_4_scaffold_5166 178_004_scaffold_5166
Species: Streptococcus sp. SR4 (100%)
1 1131 bp 41.03 4.77 94.96
NECEvent2014_8_4_scaffold_4197 178_004_scaffold_4197
Species: Streptococcus pneumoniae (100%)
1 1449 bp 43.20 4.76 89.03
NECEvent2014_8_4_scaffold_4733 178_004_scaffold_4733
Species: Streptococcus sp. C150 (50%)
2 1260 bp 43.65 4.76 95.71
NECEvent2014_8_4_scaffold_2537 178_004_scaffold_2537
Species: Streptococcus sp. HSISS2 (50%)
4 2582 bp 40.09 4.76 80.17
NECEvent2014_8_4_scaffold_5397 178_004_scaffold_5397
Species: Streptococcus salivarius (50%)
2 1072 bp 39.74 4.76 68.84
NECEvent2014_8_4_scaffold_3108 178_004_scaffold_3108
Species: Streptococcus sp. C150 (100%)
2 2018 bp 42.22 4.76 95.44
NECEvent2014_8_4_scaffold_4719 178_004_scaffold_4719
Species: Streptococcus sp. HSISS2 (100%)
1 1263 bp 40.70 4.75 86.94
NECEvent2014_8_4_scaffold_1807 178_004_scaffold_1807
Species: Streptococcus sp. C150 (100%)
1 3565 bp 42.64 4.75 93.58
NECEvent2014_8_4_scaffold_4179 178_004_scaffold_4179
Species: Streptococcus sp. HSISS2 (66.67%)
3 1456 bp 37.50 4.74 89.63
NECEvent2014_8_4_scaffold_4706 178_004_scaffold_4706
Species: Streptococcus sp. HSISS3 (50%)
2 1267 bp 41.04 4.74 99.68
NECEvent2014_8_4_scaffold_3202 178_004_scaffold_3202
Species: Streptococcus sp. HSISS1 (100%)
1 1960 bp 41.53 4.74 73.47
NECEvent2014_8_4_scaffold_5522 178_004_scaffold_5522
Species: Streptococcus mitis (50%)
2 1044 bp 37.74 4.74 98.56
NECEvent2014_8_4_scaffold_1644 178_004_scaffold_1644
Species: Streptococcus sp. HSISS3 (50%)
4 3881 bp 39.17 4.72 50.40
NECEvent2014_8_4_scaffold_5511 178_004_scaffold_5511
Genus: Streptococcus (100%)
3 1048 bp 39.12 4.72 75.29
NECEvent2014_8_4_scaffold_4330 178_004_scaffold_4330
Species: Streptococcus sp. HSISS3 (100%)
2 1397 bp 41.16 4.72 86.33
NECEvent2014_8_4_scaffold_4896 178_004_scaffold_4896
Species: Streptococcus oralis (100%)
2 1208 bp 38.08 4.72 82.70
NECEvent2014_8_4_scaffold_1569 178_004_scaffold_1569
Species: Streptococcus sp. HSISS3 (50%)
4 4067 bp 40.52 4.72 88.59
NECEvent2014_8_4_scaffold_4163 178_004_scaffold_4163
Species: Streptococcus sp. HSISS2 (100%)
1 1465 bp 38.91 4.71 99.93
NECEvent2014_8_4_scaffold_4165 178_004_scaffold_4165
Species: Streptococcus salivarius (100%)
2 1464 bp 35.38 4.71 99.80
NECEvent2014_8_4_scaffold_3474 178_004_scaffold_3474
Species: Streptococcus sp. C150 (50%)
2 1783 bp 37.30 4.71 80.59
NECEvent2014_8_4_scaffold_3550 178_004_scaffold_3550
Species: Streptococcus salivarius (50%)
2 1753 bp 38.11 4.71 74.44
NECEvent2014_8_4_scaffold_3044 178_004_scaffold_3044
Species: Streptococcus sp. HSISS2 (66.67%)
3 2071 bp 42.93 4.71 95.17
NECEvent2014_8_4_scaffold_1771 178_004_scaffold_1771
Species: Streptococcus salivarius (75%)
4 3627 bp 40.31 4.71 85.28
NECEvent2014_8_4_scaffold_1918 178_004_scaffold_1918
Genus: Streptococcus (100%)
3 3384 bp 44.21 4.70 99.82
NECEvent2014_8_4_scaffold_3742 178_004_scaffold_3742
Species: Streptococcus sp. HSISS3 (100%)
1 1660 bp 40.30 4.70 77.89
NECEvent2014_8_4_scaffold_3746 178_004_scaffold_3746
Species: Streptococcus sp. HSISS3 (100%)
1 1658 bp 38.06 4.70 90.29
NECEvent2014_8_4_scaffold_5101 178_004_scaffold_5101
Species: Streptococcus salivarius (50%)
2 1151 bp 32.32 4.69 88.36
NECEvent2014_8_4_scaffold_3261 178_004_scaffold_3261
Species: Streptococcus mitis (50%)
2 1922 bp 34.96 4.68 96.46
NECEvent2014_8_4_scaffold_5081 178_004_scaffold_5081
Species: Streptococcus salivarius (50%)
2 1157 bp 37.86 4.67 93.86
NECEvent2014_8_4_scaffold_3248 178_004_scaffold_3248
Species: Streptococcus sp. HSISS2 (100%)
2 1933 bp 42.37 4.66 87.84
NECEvent2014_8_4_scaffold_1573 178_004_scaffold_1573
Species: Streptococcus sp. HSISS3 (75%)
4 4054 bp 38.46 4.66 87.77
Displaying items 351-400 of 676 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.