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NECEvent2014_8_4_Streptococcus_mitis-rel_41_5_partial

NECEvent2014_8_4_Streptococcus_mitis_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus mitis  →  Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 451-486 of 486 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_1864 178_004_scaffold_1864
Genus: Streptococcus (100%)
4 3465 bp 38.82 6.54 97.06
NECEvent2014_8_4_scaffold_669 178_004_scaffold_669
Species: Streptococcus sp. HSISS3 (71.43%)
7 9447 bp 41.61 6.54 91.11
NECEvent2014_8_4_scaffold_3934 178_004_scaffold_3934
Species: Streptococcus mitis (100%)
3 1564 bp 38.49 6.62 95.33
NECEvent2014_8_4_scaffold_2020 178_004_scaffold_2020
Species: Streptococcus mitis (100%)
4 3211 bp 43.07 6.63 96.23
NECEvent2014_8_4_scaffold_2862 178_004_scaffold_2862
Species: Streptococcus mitis (66.67%)
3 2241 bp 42.84 6.63 95.31
NECEvent2014_8_4_scaffold_977 178_004_scaffold_977
Genus: Streptococcus (100%)
5 6688 bp 42.25 6.66 87.29
NECEvent2014_8_4_scaffold_3542 178_004_scaffold_3542
Species: Streptococcus sp. ACS2 (66.67%)
3 1755 bp 46.78 6.67 100.00
NECEvent2014_8_4_scaffold_1220 178_004_scaffold_1220
Genus: Streptococcus (85.71%)
7 5273 bp 42.01 6.71 96.34
NECEvent2014_8_4_scaffold_1378 178_004_scaffold_1378
Genus: Streptococcus (100%)
5 4564 bp 42.07 6.74 96.69
NECEvent2014_8_4_scaffold_1605 178_004_scaffold_1605
Genus: Streptococcus (100%)
3 3965 bp 37.98 6.77 99.57
NECEvent2014_8_4_scaffold_1964 178_004_scaffold_1964
Genus: Streptococcus (100%)
3 3302 bp 40.61 6.77 89.85
NECEvent2014_8_4_scaffold_4817 178_004_scaffold_4817
Species: Streptococcus sp. M143 (50%)
2 1234 bp 36.79 6.81 75.61
NECEvent2014_8_4_scaffold_2696 178_004_scaffold_2696
Species: Streptococcus sp. HSISS3 (66.67%)
3 2418 bp 41.19 6.82 79.16
NECEvent2014_8_4_scaffold_4062 178_004_scaffold_4062
Species: Streptococcus mitis (100%)
1 1511 bp 39.71 6.85 99.87
NECEvent2014_8_4_scaffold_4164 178_004_scaffold_4164
Species: Streptococcus mitis (50%)
2 1465 bp 42.87 6.86 103.62
NECEvent2014_8_4_scaffold_3975 178_004_scaffold_3975
Species: Streptococcus mitis (100%)
1 1546 bp 41.85 6.89 84.41
NECEvent2014_8_4_scaffold_5168 178_004_scaffold_5168
Species: Streptococcus mitis (100%)
1 1131 bp 44.39 6.90 97.88
NECEvent2014_8_4_scaffold_2653 178_004_scaffold_2653
Species: Streptococcus sp. HSISS2 (66.67%)
3 2466 bp 41.20 6.93 96.11
NECEvent2014_8_4_scaffold_2374 178_004_scaffold_2374
Genus: Streptococcus (100%)
5 2772 bp 40.08 6.98 88.74
NECEvent2014_8_4_scaffold_5327 178_004_scaffold_5327
Species: Streptococcus mitis (100%)
2 1088 bp 41.64 7.03 72.79
NECEvent2014_8_4_scaffold_4949 178_004_scaffold_4949
Species: Streptococcus mitis (100%)
2 1194 bp 45.81 7.04 98.74
NECEvent2014_8_4_scaffold_2985 178_004_scaffold_2985
Species: Streptococcus mitis (75%)
4 2125 bp 42.64 7.06 88.52
NECEvent2014_8_4_scaffold_2255 178_004_scaffold_2255
Genus: Streptococcus (100%)
3 2911 bp 39.51 7.06 92.24
NECEvent2014_8_4_scaffold_3041 178_004_scaffold_3041
Species: Streptococcus mitis (100%)
1 2074 bp 40.16 7.09 95.03
NECEvent2014_8_4_scaffold_1415 178_004_scaffold_1415
Genus: Streptococcus (100%)
5 4448 bp 40.63 7.12 92.60
NECEvent2014_8_4_scaffold_2031 178_004_scaffold_2031
Species: Streptococcus mitis (100%)
1 3201 bp 44.61 7.22 96.63
NECEvent2014_8_4_scaffold_2107 178_004_scaffold_2107
Species: Streptococcus mitis (100%)
4 3097 bp 40.43 7.31 91.54
NECEvent2014_8_4_scaffold_2900 178_004_scaffold_2900
Genus: Streptococcus (66.67%)
3 2203 bp 41.63 7.35 96.55
NECEvent2014_8_4_scaffold_2456 178_004_scaffold_2456
Species: Streptococcus sp. HSISS2 (50%)
4 2675 bp 42.88 7.40 96.22
NECEvent2014_8_4_scaffold_1502 178_004_scaffold_1502
Species: Streptococcus mitis (100%)
1 4217 bp 39.20 7.40 99.95
NECEvent2014_8_4_scaffold_2599 178_004_scaffold_2599
Species: Streptococcus mitis (100%)
3 2527 bp 42.62 7.42 98.77
NECEvent2014_8_4_scaffold_4027 178_004_scaffold_4027
Species: Streptococcus sp. M143 (50%)
2 1527 bp 41.98 8.06 96.46
NECEvent2014_8_4_scaffold_4331 178_004_scaffold_4331
Genus: Streptococcus (66.67%)
3 1396 bp 42.12 8.17 69.70
NECEvent2014_8_4_scaffold_773 178_004_scaffold_773
Genus: Streptococcus (92.86%)
14 8428 bp 40.80 8.20 96.04
NECEvent2014_8_4_scaffold_2410 178_004_scaffold_2410
Species: Streptococcus mitis (100%)
1 2731 bp 39.07 9.78 99.85
NECEvent2014_8_4_scaffold_4521 178_004_scaffold_4521
Species: Streptococcus mitis (50%)
2 1321 bp 33.31 10.90 31.11
Displaying items 451-486 of 486 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.