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NECEvent2014_8_4_Streptococcus_mitis-rel_41_5_partial

NECEvent2014_8_4_Streptococcus_mitis_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus mitis  →  Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 201-250 of 486 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_3906 178_004_scaffold_3906
Species: Streptococcus mitis (100%)
1 1575 bp 36.32 6.19 92.57
NECEvent2014_8_4_scaffold_1415 178_004_scaffold_1415
Genus: Streptococcus (100%)
5 4448 bp 40.63 7.12 92.60
NECEvent2014_8_4_scaffold_2289 178_004_scaffold_2289
Species: Streptococcus mitis (80%)
5 2871 bp 42.81 4.39 92.69
NECEvent2014_8_4_scaffold_1297 178_004_scaffold_1297
Species: Streptococcus mitis (75%)
4 4896 bp 44.46 6.25 92.71
NECEvent2014_8_4_scaffold_2709 178_004_scaffold_2709
Species: Streptococcus mitis (100%)
2 2407 bp 38.80 3.86 92.73
NECEvent2014_8_4_scaffold_2245 178_004_scaffold_2245
Species: Streptococcus mitis (75%)
4 2922 bp 41.17 6.06 92.81
NECEvent2014_8_4_scaffold_2301 178_004_scaffold_2301
Species: Streptococcus mitis (100%)
1 2856 bp 41.84 6.51 92.86
NECEvent2014_8_4_scaffold_2250 178_004_scaffold_2250
Genus: Streptococcus (100%)
6 2916 bp 40.05 3.86 92.90
NECEvent2014_8_4_scaffold_1475 178_004_scaffold_1475
Species: Streptococcus mitis (60%)
5 4271 bp 41.63 4.28 92.93
NECEvent2014_8_4_scaffold_2967 178_004_scaffold_2967
Species: Streptococcus mitis (100%)
3 2139 bp 39.93 3.09 92.99
NECEvent2014_8_4_scaffold_1400 178_004_scaffold_1400
Species: Streptococcus mitis (100%)
5 4507 bp 40.85 4.33 92.99
NECEvent2014_8_4_scaffold_1906 178_004_scaffold_1906
Species: Streptococcus mitis (100%)
3 3397 bp 42.86 6.49 93.08
NECEvent2014_8_4_scaffold_2888 178_004_scaffold_2888
Species: Streptococcus mitis (66.67%)
3 2213 bp 41.93 5.15 93.13
NECEvent2014_8_4_scaffold_2467 178_004_scaffold_2467
Genus: Streptococcus (87.5%)
8 2660 bp 37.14 6.43 93.16
NECEvent2014_8_4_scaffold_717 178_004_scaffold_717
Species: Streptococcus mitis (75%)
4 8937 bp 43.26 5.91 93.22
NECEvent2014_8_4_scaffold_2450 178_004_scaffold_2450
Species: Streptococcus mitis (80%)
5 2684 bp 40.35 4.08 93.33
NECEvent2014_8_4_scaffold_1227 178_004_scaffold_1227
Genus: Streptococcus (87.5%)
8 5202 bp 41.52 5.88 93.37
NECEvent2014_8_4_scaffold_4245 178_004_scaffold_4245
Species: Streptococcus mitis (100%)
3 1429 bp 41.29 4.62 93.42
NECEvent2014_8_4_scaffold_2286 178_004_scaffold_2286
Species: Streptococcus mitis (75%)
4 2874 bp 42.31 6.32 93.42
NECEvent2014_8_4_scaffold_3504 178_004_scaffold_3504
Species: Streptococcus mitis (100%)
3 1769 bp 40.70 5.09 93.44
NECEvent2014_8_4_scaffold_1966 178_004_scaffold_1966
Species: Streptococcus sp. HSISS3 (50%)
4 3300 bp 39.64 4.41 93.45
NECEvent2014_8_4_scaffold_5488 178_004_scaffold_5488
Species: Streptococcus mitis (100%)
1 1052 bp 40.97 4.56 93.54
NECEvent2014_8_4_scaffold_4201 178_004_scaffold_4201
Species: Streptococcus mitis (100%)
3 1446 bp 39.14 5.39 93.57
NECEvent2014_8_4_scaffold_4557 178_004_scaffold_4557
Species: Streptococcus mitis (100%)
2 1311 bp 40.20 3.66 93.59
NECEvent2014_8_4_scaffold_1931 178_004_scaffold_1931
Species: Streptococcus mitis (75%)
4 3372 bp 42.65 5.74 93.59
NECEvent2014_8_4_scaffold_1354 178_004_scaffold_1354
Genus: Streptococcus (100%)
7 4686 bp 43.58 5.41 93.60
NECEvent2014_8_4_scaffold_799 178_004_scaffold_799
Species: Streptococcus mitis (76.92%)
13 8181 bp 41.87 4.91 93.62
NECEvent2014_8_4_scaffold_868 178_004_scaffold_868
Species: Streptococcus mitis (57.14%)
7 7470 bp 43.84 5.74 93.69
NECEvent2014_8_4_scaffold_1056 178_004_scaffold_1056
Species: Streptococcus mitis (50%)
6 6070 bp 43.16 4.99 93.71
NECEvent2014_8_4_scaffold_995 178_004_scaffold_995
Genus: Streptococcus (100%)
6 6580 bp 41.32 6.27 93.83
NECEvent2014_8_4_scaffold_5151 178_004_scaffold_5151
Species: Streptococcus mitis (100%)
2 1135 bp 44.14 5.02 93.83
NECEvent2014_8_4_scaffold_1328 178_004_scaffold_1328
Species: Streptococcus mitis (60%)
5 4820 bp 42.72 4.92 93.86
NECEvent2014_8_4_scaffold_1366 178_004_scaffold_1366
Genus: Streptococcus (100%)
7 4624 bp 39.51 5.64 93.88
NECEvent2014_8_4_scaffold_875 178_004_scaffold_875
Genus: Streptococcus (100%)
6 7424 bp 40.96 5.35 93.95
NECEvent2014_8_4_scaffold_2795 178_004_scaffold_2795
Species: Streptococcus mitis (100%)
3 2315 bp 41.04 5.05 93.95
NECEvent2014_8_4_scaffold_3764 178_004_scaffold_3764
Species: Streptococcus mitis (100%)
2 1644 bp 42.15 4.38 93.98
NECEvent2014_8_4_scaffold_4502 178_004_scaffold_4502
Species: Streptococcus mitis (50%)
2 1331 bp 42.15 4.85 93.99
NECEvent2014_8_4_scaffold_3190 178_004_scaffold_3190
Species: Streptococcus mitis (100%)
2 1966 bp 43.18 4.88 94.00
NECEvent2014_8_4_scaffold_1857 178_004_scaffold_1857
Species: Streptococcus salivarius (60%)
5 3479 bp 42.68 5.00 94.16
NECEvent2014_8_4_scaffold_1741 178_004_scaffold_1741
Genus: Streptococcus (100%)
3 3686 bp 39.83 4.31 94.17
NECEvent2014_8_4_scaffold_1677 178_004_scaffold_1677
Species: Streptococcus mitis (80%)
5 3819 bp 36.71 5.46 94.19
NECEvent2014_8_4_scaffold_3526 178_004_scaffold_3526
Species: Streptococcus mitis (100%)
3 1761 bp 43.44 4.60 94.21
NECEvent2014_8_4_scaffold_3299 178_004_scaffold_3299
Species: Streptococcus mitis (66.67%)
3 1894 bp 43.29 5.54 94.25
NECEvent2014_8_4_scaffold_1635 178_004_scaffold_1635
Species: Streptococcus mitis (100%)
3 3891 bp 38.04 6.01 94.29
NECEvent2014_8_4_scaffold_4707 178_004_scaffold_4707
Species: Streptococcus pneumoniae (100%)
1 1266 bp 38.86 6.40 94.31
NECEvent2014_8_4_scaffold_1613 178_004_scaffold_1613
Species: Streptococcus mitis (66.67%)
3 3947 bp 42.67 5.24 94.32
NECEvent2014_8_4_scaffold_2572 178_004_scaffold_2572
Species: Streptococcus sp. HSISS1 (50%)
4 2546 bp 41.56 4.83 94.38
NECEvent2014_8_4_scaffold_1597 178_004_scaffold_1597
Species: Streptococcus mitis (100%)
4 3979 bp 44.03 5.20 94.40
NECEvent2014_8_4_scaffold_1511 178_004_scaffold_1511
Species: Streptococcus mitis (100%)
4 4188 bp 42.69 6.41 94.41
NECEvent2014_8_4_scaffold_2846 178_004_scaffold_2846
Species: Streptococcus mitis (66.67%)
3 2259 bp 40.68 5.44 94.42
Displaying items 201-250 of 486 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.