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NECEvent2014_8_4_Streptococcus_mitis-rel_41_5_partial

NECEvent2014_8_4_Streptococcus_mitis_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus mitis  →  Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 151-200 of 486 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_2981 178_004_scaffold_2981
Species: Streptococcus mitis (50%)
2 2127 bp 38.69 4.80 90.27
NECEvent2014_8_4_scaffold_4777 178_004_scaffold_4777
Species: Streptococcus mitis (50%)
2 1246 bp 35.71 4.33 90.29
NECEvent2014_8_4_scaffold_5393 178_004_scaffold_5393
Species: Streptococcus mitis (100%)
1 1073 bp 37.19 4.33 90.31
NECEvent2014_8_4_scaffold_3337 178_004_scaffold_3337
Species: Streptococcus mitis (100%)
1 1873 bp 41.16 4.97 90.34
NECEvent2014_8_4_scaffold_1754 178_004_scaffold_1754
Species: Streptococcus sp. HSISS3 (66.67%)
3 3660 bp 40.38 4.55 90.41
NECEvent2014_8_4_scaffold_1107 178_004_scaffold_1107
Genus: Streptococcus (100%)
8 5800 bp 38.81 5.17 90.52
NECEvent2014_8_4_scaffold_3579 178_004_scaffold_3579
Species: Streptococcus mitis (66.67%)
3 1737 bp 33.85 4.75 90.67
NECEvent2014_8_4_scaffold_3856 178_004_scaffold_3856
Species: Streptococcus mitis (66.67%)
3 1601 bp 41.85 5.15 90.69
NECEvent2014_8_4_scaffold_2198 178_004_scaffold_2198
Species: Streptococcus mitis (75%)
4 2980 bp 43.76 4.63 90.70
NECEvent2014_8_4_scaffold_3837 178_004_scaffold_3837
Species: Streptococcus mitis (50%)
2 1610 bp 39.38 5.40 90.75
NECEvent2014_8_4_scaffold_3756 178_004_scaffold_3756
Species: Streptococcus sp. HSISS3 (66.67%)
3 1652 bp 40.44 4.36 90.80
NECEvent2014_8_4_scaffold_3301 178_004_scaffold_3301
Species: Streptococcus mitis (100%)
2 1893 bp 42.68 5.39 90.81
NECEvent2014_8_4_scaffold_3914 178_004_scaffold_3914
Species: Streptococcus mitis (100%)
2 1571 bp 43.67 3.53 90.90
NECEvent2014_8_4_scaffold_559 178_004_scaffold_559
Genus: Streptococcus (100%)
11 11008 bp 42.01 6.21 90.94
NECEvent2014_8_4_scaffold_1467 178_004_scaffold_1467
Genus: Streptococcus (100%)
5 4293 bp 37.27 5.80 90.99
NECEvent2014_8_4_scaffold_1686 178_004_scaffold_1686
Genus: Streptococcus (100%)
5 3810 bp 42.31 5.55 91.02
NECEvent2014_8_4_scaffold_603 178_004_scaffold_603
Genus: Streptococcus (100%)
18 10325 bp 40.12 6.33 91.03
NECEvent2014_8_4_scaffold_1434 178_004_scaffold_1434
Genus: Streptococcus (100%)
7 4406 bp 43.15 5.11 91.04
NECEvent2014_8_4_scaffold_669 178_004_scaffold_669
Species: Streptococcus sp. HSISS3 (71.43%)
7 9447 bp 41.61 6.54 91.11
NECEvent2014_8_4_scaffold_4874 178_004_scaffold_4874
Species: Streptococcus mitis (66.67%)
3 1215 bp 39.92 4.20 91.11
NECEvent2014_8_4_scaffold_1035 178_004_scaffold_1035
Species: Streptococcus mitis (100%)
7 6266 bp 43.25 5.03 91.16
NECEvent2014_8_4_scaffold_2086 178_004_scaffold_2086
Species: Streptococcus mitis (75%)
4 3126 bp 38.74 3.69 91.17
NECEvent2014_8_4_scaffold_732 178_004_scaffold_732
Genus: Streptococcus (75%)
8 8762 bp 39.40 5.70 91.20
NECEvent2014_8_4_scaffold_3586 178_004_scaffold_3586
Species: Streptococcus mitis (66.67%)
3 1733 bp 44.26 4.76 91.23
NECEvent2014_8_4_scaffold_722 178_004_scaffold_722
Genus: Streptococcus (100%)
9 8890 bp 42.42 5.96 91.25
NECEvent2014_8_4_scaffold_3148 178_004_scaffold_3148
Species: Streptococcus mitis (100%)
4 1995 bp 41.85 4.51 91.28
NECEvent2014_8_4_scaffold_3820 178_004_scaffold_3820
Species: Streptococcus mitis (66.67%)
3 1616 bp 44.18 4.83 91.34
NECEvent2014_8_4_scaffold_2064 178_004_scaffold_2064
Species: Streptococcus sp. HSISS3 (60%)
5 3151 bp 41.32 4.95 91.40
NECEvent2014_8_4_scaffold_2788 178_004_scaffold_2788
Species: Streptococcus mitis (100%)
3 2322 bp 42.59 6.07 91.47
NECEvent2014_8_4_scaffold_2107 178_004_scaffold_2107
Species: Streptococcus mitis (100%)
4 3097 bp 40.43 7.31 91.54
NECEvent2014_8_4_scaffold_1477 178_004_scaffold_1477
Genus: Streptococcus (100%)
5 4266 bp 41.02 6.33 91.56
NECEvent2014_8_4_scaffold_3217 178_004_scaffold_3217
Species: Streptococcus mitis (75%)
4 1951 bp 44.39 5.30 91.65
NECEvent2014_8_4_scaffold_2638 178_004_scaffold_2638
Species: Streptococcus mitis (100%)
3 2477 bp 39.89 4.00 91.68
NECEvent2014_8_4_scaffold_4186 178_004_scaffold_4186
Species: Streptococcus mitis (100%)
1 1454 bp 33.77 4.02 91.82
NECEvent2014_8_4_scaffold_739 178_004_scaffold_739
Species: Streptococcus mitis (66.67%)
9 8727 bp 42.18 6.50 91.85
NECEvent2014_8_4_scaffold_2918 178_004_scaffold_2918
Species: Streptococcus mitis (100%)
3 2188 bp 41.86 4.46 92.00
NECEvent2014_8_4_scaffold_2023 178_004_scaffold_2023
Species: Streptococcus mitis (50%)
4 3211 bp 39.40 4.58 92.12
NECEvent2014_8_4_scaffold_4472 178_004_scaffold_4472
Species: Streptococcus mitis (100%)
2 1341 bp 41.69 4.70 92.17
NECEvent2014_8_4_scaffold_1951 178_004_scaffold_1951
Genus: Streptococcus (100%)
5 3328 bp 40.90 4.15 92.22
NECEvent2014_8_4_scaffold_2255 178_004_scaffold_2255
Genus: Streptococcus (100%)
3 2911 bp 39.51 7.06 92.24
NECEvent2014_8_4_scaffold_3159 178_004_scaffold_3159
Genus: Streptococcus (100%)
3 1984 bp 44.00 4.99 92.24
NECEvent2014_8_4_scaffold_1672 178_004_scaffold_1672
Species: Streptococcus mitis (100%)
4 3825 bp 40.00 4.98 92.31
NECEvent2014_8_4_scaffold_2326 178_004_scaffold_2326
Species: Streptococcus mitis (100%)
2 2829 bp 42.77 4.93 92.36
NECEvent2014_8_4_scaffold_1481 178_004_scaffold_1481
Genus: Streptococcus (100%)
5 4257 bp 41.30 5.81 92.39
NECEvent2014_8_4_scaffold_1711 178_004_scaffold_1711
Species: Streptococcus mitis (80%)
5 3750 bp 40.64 6.24 92.40
NECEvent2014_8_4_scaffold_4400 178_004_scaffold_4400
Species: Streptococcus mitis (100%)
2 1370 bp 37.81 3.50 92.41
NECEvent2014_8_4_scaffold_1831 178_004_scaffold_1831
Species: Streptococcus mitis (60%)
5 3537 bp 44.02 5.39 92.45
NECEvent2014_8_4_scaffold_2416 178_004_scaffold_2416
Species: Streptococcus sp. HSISS3 (60%)
5 2725 bp 42.24 3.85 92.48
NECEvent2014_8_4_scaffold_2058 178_004_scaffold_2058
Species: Streptococcus mitis (50%)
6 3158 bp 41.55 5.41 92.53
NECEvent2014_8_4_scaffold_4204 178_004_scaffold_4204
Species: Streptococcus mitis (100%)
2 1446 bp 39.35 4.77 92.53
Displaying items 151-200 of 486 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.