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NECEvent2014_8_4_Streptococcus_mitis-rel_41_5_partial

NECEvent2014_8_4_Streptococcus_mitis_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus mitis  →  Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 101-150 of 486 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_3352 178_004_scaffold_3352
Species: Streptococcus pneumoniae (50%)
2 1862 bp 40.87 4.59 87.33
NECEvent2014_8_4_scaffold_2043 178_004_scaffold_2043
Species: Streptococcus mitis (100%)
5 3177 bp 42.15 4.53 87.35
NECEvent2014_8_4_scaffold_3583 178_004_scaffold_3583
Genus: Streptococcus (66.67%)
3 1734 bp 37.89 5.54 87.37
NECEvent2014_8_4_scaffold_4232 178_004_scaffold_4232
Species: Streptococcus mitis (100%)
2 1435 bp 42.93 3.97 87.39
NECEvent2014_8_4_scaffold_2520 178_004_scaffold_2520
Species: Streptococcus mitis (100%)
4 2601 bp 41.87 5.59 87.43
NECEvent2014_8_4_scaffold_5321 178_004_scaffold_5321
Species: Streptococcus pneumoniae (50%)
2 1090 bp 39.91 5.37 87.80
NECEvent2014_8_4_scaffold_1344 178_004_scaffold_1344
Species: Streptococcus mitis (57.14%)
7 4737 bp 43.55 6.40 88.03
NECEvent2014_8_4_scaffold_2664 178_004_scaffold_2664
Species: Streptococcus mitis (66.67%)
3 2457 bp 47.50 6.11 88.03
NECEvent2014_8_4_scaffold_2605 178_004_scaffold_2605
Species: Streptococcus sp. HSISS3 (66.67%)
3 2519 bp 41.33 4.23 88.13
NECEvent2014_8_4_scaffold_583 178_004_scaffold_583
Species: Streptococcus mitis (61.54%)
13 10614 bp 42.17 6.16 88.19
NECEvent2014_8_4_scaffold_2719 178_004_scaffold_2719
Species: Streptococcus salivarius (50%)
4 2395 bp 35.91 5.39 88.43
NECEvent2014_8_4_scaffold_2985 178_004_scaffold_2985
Species: Streptococcus mitis (75%)
4 2125 bp 42.64 7.06 88.52
NECEvent2014_8_4_scaffold_4007 178_004_scaffold_4007
Genus: Streptococcus (100%)
3 1534 bp 36.90 5.28 88.59
NECEvent2014_8_4_scaffold_4333 178_004_scaffold_4333
Species: Streptococcus mitis (100%)
1 1395 bp 43.51 3.76 88.60
NECEvent2014_8_4_scaffold_3255 178_004_scaffold_3255
Species: Streptococcus mitis (100%)
1 1924 bp 43.71 4.83 88.72
NECEvent2014_8_4_scaffold_2374 178_004_scaffold_2374
Genus: Streptococcus (100%)
5 2772 bp 40.08 6.98 88.74
NECEvent2014_8_4_scaffold_973 178_004_scaffold_973
Genus: Streptococcus (100%)
7 6701 bp 43.62 5.06 88.82
NECEvent2014_8_4_scaffold_4288 178_004_scaffold_4288
Species: Streptococcus mitis (100%)
2 1411 bp 42.95 5.53 88.87
NECEvent2014_8_4_scaffold_1473 178_004_scaffold_1473
Genus: Streptococcus (100%)
4 4280 bp 39.60 5.47 88.88
NECEvent2014_8_4_scaffold_2940 178_004_scaffold_2940
Species: Streptococcus mitis (100%)
2 2167 bp 34.93 5.12 88.88
NECEvent2014_8_4_scaffold_4596 178_004_scaffold_4596
Species: Streptococcus mitis (66.67%)
3 1299 bp 41.19 5.54 88.91
NECEvent2014_8_4_scaffold_1856 178_004_scaffold_1856
Species: Streptococcus mitis (50%)
6 3481 bp 43.69 4.35 88.94
NECEvent2014_8_4_scaffold_1870 178_004_scaffold_1870
Species: Streptococcus sp. M334 (66.67%)
3 3455 bp 37.22 4.82 89.00
NECEvent2014_8_4_scaffold_2472 178_004_scaffold_2472
Genus: Streptococcus (66.67%)
3 2656 bp 42.58 5.99 89.01
NECEvent2014_8_4_scaffold_4947 178_004_scaffold_4947
Species: Streptococcus mitis (100%)
1 1195 bp 38.58 4.27 89.12
NECEvent2014_8_4_scaffold_5418 178_004_scaffold_5418
Species: Streptococcus mitis (100%)
3 1067 bp 40.39 4.36 89.13
NECEvent2014_8_4_scaffold_2458 178_004_scaffold_2458
Species: Streptococcus sp. HSISS3 (66.67%)
3 2673 bp 41.75 6.29 89.23
NECEvent2014_8_4_scaffold_2305 178_004_scaffold_2305
Genus: Streptococcus (100%)
3 2851 bp 40.69 4.95 89.34
NECEvent2014_8_4_scaffold_1574 178_004_scaffold_1574
Species: Streptococcus mitis (50%)
4 4052 bp 45.14 4.55 89.44
NECEvent2014_8_4_scaffold_2050 178_004_scaffold_2050
Species: Streptococcus mitis (50%)
2 3171 bp 41.78 6.53 89.59
NECEvent2014_8_4_scaffold_5551 178_004_scaffold_5551
Species: Streptococcus mitis (100%)
1 1038 bp 36.71 5.78 89.60
NECEvent2014_8_4_scaffold_2078 178_004_scaffold_2078
Species: Streptococcus mitis (50%)
4 3136 bp 43.18 4.59 89.64
NECEvent2014_8_4_scaffold_1232 178_004_scaffold_1232
Genus: Streptococcus (100%)
5 5174 bp 39.97 5.33 89.64
NECEvent2014_8_4_scaffold_3473 178_004_scaffold_3473
Species: Streptococcus mitis (100%)
2 1787 bp 40.74 4.95 89.82
NECEvent2014_8_4_scaffold_1668 178_004_scaffold_1668
Species: Streptococcus mitis (80%)
5 3831 bp 42.36 4.42 89.82
NECEvent2014_8_4_scaffold_1964 178_004_scaffold_1964
Genus: Streptococcus (100%)
3 3302 bp 40.61 6.77 89.85
NECEvent2014_8_4_scaffold_1582 178_004_scaffold_1582
Species: Streptococcus salivarius (50%)
6 4018 bp 41.96 5.94 89.90
NECEvent2014_8_4_scaffold_5093 178_004_scaffold_5093
Species: Streptococcus sp. HSISS3 (66.67%)
3 1154 bp 37.61 4.29 89.95
NECEvent2014_8_4_scaffold_4705 178_004_scaffold_4705
Species: Streptococcus mitis (100%)
2 1267 bp 41.28 3.08 89.98
NECEvent2014_8_4_scaffold_2314 178_004_scaffold_2314
Genus: Streptococcus (100%)
5 2843 bp 41.22 4.33 90.01
NECEvent2014_8_4_scaffold_3752 178_004_scaffold_3752
Species: Streptococcus mitis (100%)
2 1653 bp 43.19 4.45 90.02
NECEvent2014_8_4_scaffold_4096 178_004_scaffold_4096
Species: Streptococcus mitis (100%)
2 1493 bp 39.65 4.22 90.02
NECEvent2014_8_4_scaffold_3620 178_004_scaffold_3620
Genus: Streptococcus (100%)
3 1718 bp 38.13 3.49 90.10
NECEvent2014_8_4_scaffold_2625 178_004_scaffold_2625
Species: Streptococcus mitis (100%)
3 2490 bp 39.48 5.30 90.12
NECEvent2014_8_4_scaffold_5014 178_004_scaffold_5014
Species: Streptococcus mitis (50%)
2 1178 bp 37.69 5.86 90.15
NECEvent2014_8_4_scaffold_3201 178_004_scaffold_3201
Species: Streptococcus mitis (66.67%)
3 1960 bp 38.01 5.51 90.15
NECEvent2014_8_4_scaffold_4548 178_004_scaffold_4548
Species: Streptococcus mitis (100%)
3 1314 bp 40.18 5.71 90.18
NECEvent2014_8_4_scaffold_2838 178_004_scaffold_2838
Genus: Streptococcus (100%)
5 2265 bp 39.47 4.24 90.20
NECEvent2014_8_4_scaffold_3224 178_004_scaffold_3224
Species: Streptococcus mitis (100%)
2 1948 bp 40.97 4.77 90.25
NECEvent2014_8_4_scaffold_1005 178_004_scaffold_1005
Genus: Streptococcus (100%)
12 6494 bp 39.68 6.12 90.27
Displaying items 101-150 of 486 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.