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NECEvent2014_8_4_Streptococcus_mitis-rel_41_5_partial

NECEvent2014_8_4_Streptococcus_mitis_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus mitis  →  Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 51-100 of 486 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_2543 178_004_scaffold_2543
Species: Streptococcus sp. HSISS2 (50%)
4 2578 bp 39.64 5.00 82.85
NECEvent2014_8_4_scaffold_2189 178_004_scaffold_2189
Species: Streptococcus mitis (100%)
1 2995 bp 42.44 5.16 82.94
NECEvent2014_8_4_scaffold_3439 178_004_scaffold_3439
Genus: Streptococcus (100%)
3 1808 bp 37.72 5.97 82.96
NECEvent2014_8_4_scaffold_4212 178_004_scaffold_4212
Species: Streptococcus sp. HSISS1 (66.67%)
3 1442 bp 36.20 5.93 83.01
NECEvent2014_8_4_scaffold_3992 178_004_scaffold_3992
Species: Streptococcus mitis (100%)
3 1539 bp 43.34 4.29 83.04
NECEvent2014_8_4_scaffold_5003 178_004_scaffold_5003
Species: Streptococcus mitis (100%)
1 1180 bp 41.27 5.59 83.14
NECEvent2014_8_4_scaffold_2857 178_004_scaffold_2857
Species: Streptococcus mitis (75%)
4 2249 bp 40.37 4.87 83.24
NECEvent2014_8_4_scaffold_4192 178_004_scaffold_4192
Species: Streptococcus mitis (66.67%)
3 1451 bp 40.45 5.89 83.32
NECEvent2014_8_4_scaffold_5492 178_004_scaffold_5492
Species: Streptococcus mitis (50%)
2 1052 bp 42.59 3.14 83.56
NECEvent2014_8_4_scaffold_5183 178_004_scaffold_5183
Species: Streptococcus sp. M334 (50%)
2 1127 bp 40.91 3.99 83.58
NECEvent2014_8_4_scaffold_3673 178_004_scaffold_3673
Species: Streptococcus mitis (100%)
3 1692 bp 38.06 3.90 83.69
NECEvent2014_8_4_scaffold_1566 178_004_scaffold_1566
Species: Streptococcus mitis (100%)
3 4071 bp 40.06 4.05 83.71
NECEvent2014_8_4_scaffold_3177 178_004_scaffold_3177
Species: Streptococcus mitis (66.67%)
3 1973 bp 42.68 4.56 84.09
NECEvent2014_8_4_scaffold_4451 178_004_scaffold_4451
Species: Streptococcus sp. DORA_10 (100%)
1 1350 bp 41.63 4.78 84.22
NECEvent2014_8_4_scaffold_4413 178_004_scaffold_4413
Genus: Streptococcus (100%)
3 1366 bp 38.65 5.27 84.33
NECEvent2014_8_4_scaffold_1280 178_004_scaffold_1280
Species: Streptococcus mitis (85.71%)
7 4936 bp 40.68 4.50 84.36
NECEvent2014_8_4_scaffold_5181 178_004_scaffold_5181
Species: Streptococcus mitis (66.67%)
3 1127 bp 37.98 3.99 84.38
NECEvent2014_8_4_scaffold_3975 178_004_scaffold_3975
Species: Streptococcus mitis (100%)
1 1546 bp 41.85 6.89 84.41
NECEvent2014_8_4_scaffold_4939 178_004_scaffold_4939
Species: Streptococcus mitis (100%)
1 1197 bp 40.52 5.76 84.46
NECEvent2014_8_4_scaffold_4287 178_004_scaffold_4287
Species: Streptococcus mitis (100%)
1 1412 bp 42.85 4.25 84.77
NECEvent2014_8_4_scaffold_2427 178_004_scaffold_2427
Species: Streptococcus mitis (75%)
4 2710 bp 45.02 6.53 85.13
NECEvent2014_8_4_scaffold_2504 178_004_scaffold_2504
Genus: Streptococcus (80%)
5 2620 bp 43.28 5.27 85.19
NECEvent2014_8_4_scaffold_1362 178_004_scaffold_1362
Genus: Streptococcus (100%)
5 4647 bp 40.43 5.07 85.35
NECEvent2014_8_4_scaffold_4948 178_004_scaffold_4948
Species: Streptococcus mitis (66.67%)
3 1195 bp 40.00 3.51 85.36
NECEvent2014_8_4_scaffold_3023 178_004_scaffold_3023
Genus: Streptococcus (100%)
3 2091 bp 40.70 6.03 85.37
NECEvent2014_8_4_scaffold_3353 178_004_scaffold_3353
Species: Streptococcus sp. C150 (66.67%)
3 1862 bp 41.84 4.03 85.71
NECEvent2014_8_4_scaffold_2535 178_004_scaffold_2535
Genus: Streptococcus (100%)
5 2585 bp 38.49 6.27 85.76
NECEvent2014_8_4_scaffold_661 178_004_scaffold_661
Species: Streptococcus mitis (77.78%)
9 9555 bp 42.40 5.12 85.81
NECEvent2014_8_4_scaffold_1994 178_004_scaffold_1994
Species: Streptococcus mitis (100%)
2 3254 bp 43.05 6.04 85.83
NECEvent2014_8_4_scaffold_4872 178_004_scaffold_4872
Species: Streptococcus mitis (100%)
1 1216 bp 40.54 5.92 85.86
NECEvent2014_8_4_scaffold_5026 178_004_scaffold_5026
Species: Streptococcus mitis (100%)
1 1173 bp 40.92 3.84 85.93
NECEvent2014_8_4_scaffold_1505 178_004_scaffold_1505
Genus: Streptococcus (100%)
5 4209 bp 43.31 5.67 86.03
NECEvent2014_8_4_scaffold_2448 178_004_scaffold_2448
Species: Streptococcus mitis (100%)
5 2685 bp 40.19 5.59 86.03
NECEvent2014_8_4_scaffold_1702 178_004_scaffold_1702
Genus: Streptococcus (100%)
4 3771 bp 40.94 6.28 86.08
NECEvent2014_8_4_scaffold_2619 178_004_scaffold_2619
Species: Streptococcus salivarius (66.67%)
3 2497 bp 38.81 6.25 86.14
NECEvent2014_8_4_scaffold_4157 178_004_scaffold_4157
Species: Streptococcus mitis (66.67%)
3 1466 bp 38.61 5.53 86.15
NECEvent2014_8_4_scaffold_3780 178_004_scaffold_3780
Species: Streptococcus pseudopneumoniae (100%)
1 1636 bp 41.63 4.13 86.19
NECEvent2014_8_4_scaffold_4992 178_004_scaffold_4992
Species: Streptococcus mitis (100%)
2 1183 bp 41.08 2.66 86.48
NECEvent2014_8_4_scaffold_1606 178_004_scaffold_1606
Species: Streptococcus mitis (80%)
5 3959 bp 41.70 5.30 86.54
NECEvent2014_8_4_scaffold_2120 178_004_scaffold_2120
Species: Streptococcus mitis (50%)
4 3077 bp 41.66 4.14 86.58
NECEvent2014_8_4_scaffold_5381 178_004_scaffold_5381
Species: Streptococcus mitis (100%)
2 1076 bp 38.48 5.02 86.71
NECEvent2014_8_4_scaffold_3626 178_004_scaffold_3626
Species: Streptococcus pneumoniae (50%)
2 1716 bp 41.72 5.24 86.71
NECEvent2014_8_4_scaffold_1038 178_004_scaffold_1038
Species: Streptococcus sp. C150 (50%)
6 6228 bp 40.96 5.44 86.95
NECEvent2014_8_4_scaffold_1045 178_004_scaffold_1045
Genus: Streptococcus (100%)
6 6153 bp 40.97 6.19 86.98
NECEvent2014_8_4_scaffold_3730 178_004_scaffold_3730
Species: Streptococcus sp. SK643 (50%)
2 1664 bp 39.54 5.68 87.08
NECEvent2014_8_4_scaffold_1767 178_004_scaffold_1767
Species: Streptococcus sp. HSISS3 (50%)
4 3634 bp 43.31 5.86 87.18
NECEvent2014_8_4_scaffold_2551 178_004_scaffold_2551
Species: Streptococcus mitis (50%)
4 2570 bp 42.57 4.20 87.20
NECEvent2014_8_4_scaffold_5536 178_004_scaffold_5536
Species: Streptococcus mitis (100%)
3 1042 bp 39.25 4.46 87.24
NECEvent2014_8_4_scaffold_1462 178_004_scaffold_1462
Species: Streptococcus mitis (80%)
5 4295 bp 41.14 4.92 87.24
NECEvent2014_8_4_scaffold_977 178_004_scaffold_977
Genus: Streptococcus (100%)
5 6688 bp 42.25 6.66 87.29
Displaying items 51-100 of 486 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.