ggKbase home page

NECEvent2014_8_5_scaffold_9

Alias: 178_005_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_9_1
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

189..1988
DNA (1800bp) protein (600aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SZ36_9CLOT rbh
tlpA3; methyl-accepting chemotaxis protein TlpA
Methyl-accepting chemotaxis protein TlpA {ECO:0000313|EMBL:AGF55449.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccha
NECEvent2014_8_5_scaffold_9_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2034..2573)
DNA (540bp) protein (180aa)
Ribosomal protein L25, Ctc-form n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H837_9CLOT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=457396 sp
50S ribosomal protein L25
NECEvent2014_8_5_scaffold_9_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3060..3413
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BU05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU72832.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_8_5_scaffold_9_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3590..4852
DNA (1263bp) protein (421aa)
Putative voltage gated chloride channel family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K0V2_CLOBU
Chloride channel {ECO:0000313|EMBL:KJZ88384.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
putative voltage gated chloride channel family
NECEvent2014_8_5_scaffold_9_5
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5074..5706)
DNA (633bp) protein (211aa)
Putative Acetyltransferase, GNAT n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUH0_9CLOT
Putative Acetyltransferase, GNAT {ECO:0000313|EMBL:CDG02885.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF43
acetyltransferase domain protein
NECEvent2014_8_5_scaffold_9_6
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5806..6624
DNA (819bp) protein (273aa)
MerR regulatory family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VNZ5_CLOBI rbh
MerR regulatory family protein {ECO:0000313|EMBL:EQK45429.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] b
merR regulatory family protein
NECEvent2014_8_5_scaffold_9_7
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6707..9238
DNA (2532bp) protein (844aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CT40_CLOSO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ49258.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
NECEvent2014_8_5_scaffold_9_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9358..9825
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003670D03
Uncharacterized protein {ECO:0000313|EMBL:KIL07105.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
NECEvent2014_8_5_scaffold_9_9
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10343..11059
DNA (717bp) protein (239aa)
Serine/threonine protein kinase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCH7_9CLOT
Protein kinase {ECO:0000313|EMBL:AJG99088.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
serine/threonine protein kinase
NECEvent2014_8_5_scaffold_9_10
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11073..11687
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI98090.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
NECEvent2014_8_5_scaffold_9_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11892..14048
DNA (2157bp) protein (719aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VHP4_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY90165.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
metallophosphoesterase
NECEvent2014_8_5_scaffold_9_12
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14113..15255
DNA (1143bp) protein (381aa)
Putative membrane protein n=2 Tax=Clostridium RepID=R5T6E0_9CLOT rbh
Putative membrane protein {ECO:0000313|EMBL:CCZ61460.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridi
hypothetical protein
NECEvent2014_8_5_scaffold_9_13
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15469..15735
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WE89_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01361.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
NECEvent2014_8_5_scaffold_9_14
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15756..16535
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XJG7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY99842.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
YoaP-like domain containing protein
NECEvent2014_8_5_scaffold_9_15
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16525..17115
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002884684
Uncharacterized protein {ECO:0000313|EMBL:KEZ87237.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
NECEvent2014_8_5_scaffold_9_16
unknown

Not on your lists

17404..17556
DNA (153bp) protein (51aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_9_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18023..18835
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KWS3_CLOBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA56243.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch
NECEvent2014_8_5_scaffold_9_18
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18907..19488
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI000317C5AF
Methyltransferase type 12 {ECO:0000313|EMBL:KGK90169.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
methyltransferase type 12
NECEvent2014_8_5_scaffold_9_19
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19509..20018
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XWH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ00269.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
shikimate kinase family protein
NECEvent2014_8_5_scaffold_9_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20116..20403
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UTC7_CLOBO
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:KIL07380.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
NECEvent2014_8_5_scaffold_9_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20437..21180
DNA (744bp) protein (248aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium difficile CD160 RepID=T3D6Z6_CLODI
Flavodoxin {ECO:0000313|EMBL:KJU72886.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
4Fe-4S dicluster domain protein
NECEvent2014_8_5_scaffold_9_22
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21208..21960)
DNA (753bp) protein (251aa)
Acyl-ACP thioesterase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JL78_CELLD rbh
acyl-ACP thioesterase
Acyl-ACP thioesterase {ECO:0000313|EMBL:ADZ85723.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (s
NECEvent2014_8_5_scaffold_9_23
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22214..22864
DNA (651bp) protein (217aa)
HAD-superfamily hydrolase (EC:3.1.3.18)
HAD-superfamily hydrolase subfamily IA variant 3 n=1 Tax=Clostridium sp. CAG:221 RepID=R6FRN1_9CLOT
HAD-superfamily hydrolase subfamily IA variant 3 {ECO:0000313|EMBL:CDB15868.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental sampl
NECEvent2014_8_5_scaffold_9_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22883..23410
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26370.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_8_5_scaffold_9_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23720..25645
DNA (1926bp) protein (642aa)
OPT family oligopeptide transporter n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H857_9CLOT rbh
OPT family oligopeptide transporter {ECO:0000313|EMBL:EEH98676.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43F
OPT family oligopeptide transporter
NECEvent2014_8_5_scaffold_9_26
unknown

Not on your lists

25885..26046
DNA (162bp) protein (54aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_9_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26084..26509)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003603402
Uncharacterized protein {ECO:0000313|EMBL:EES49924.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
hypothetical protein
NECEvent2014_8_5_scaffold_9_28
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26687..27454
DNA (768bp) protein (256aa)
Acetyltransferase, GNAT family n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFF3_9FIRM rbh
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDR97258.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14
acetyltransferase
NECEvent2014_8_5_scaffold_9_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27473..27868
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8F5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98960.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative membrane protein
NECEvent2014_8_5_scaffold_9_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28170..29363
DNA (1194bp) protein (398aa)
thermostable carboxypeptidase 2 (EC:3.4.17.-)
peptidase M20 n=1 Tax=Clostridium botulinum RepID=UPI0002D7BA8E rbh
Amidohydrolase family protein {ECO:0000313|EMBL:AIY78646.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;
Displaying items 1-30 of 127 in total

View Taxonomy