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NECEvent2014_8_5_scaffold_72

Alias: 178_005_scaffold_72

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Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_72_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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101..1624
DNA (1524bp) protein (508aa)
Putative Mg chelatase family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FLV0_9CLOT
Putative Mg chelatase family protein {ECO:0000313|EMBL:CDG01609.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei
Mg chelatase, subunit ChlI
NECEvent2014_8_5_scaffold_72_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1640..2707
DNA (1068bp) protein (356aa)
DNA protecting protein DprA n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UX87_CLOBO
DNA protecting protein DprA {ECO:0000313|EMBL:EES49649.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. '
dprA; DNA protecting protein DprA
NECEvent2014_8_5_scaffold_72_3
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2692..4794
DNA (2103bp) protein (701aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1351755 species="Bacteria; Firmicute
topA; DNA topoisomerase 1 (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EZ56_9CLOT rbh
NECEvent2014_8_5_scaffold_72_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4951..5727
DNA (777bp) protein (259aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EK42_9CLOT rbh
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
transcriptional repressor CodY
NECEvent2014_8_5_scaffold_72_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6126..6827
DNA (702bp) protein (234aa)
30S ribosomal protein S2 n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IJD4_CLOBU
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.
rpsB; 30S ribosomal protein S2
NECEvent2014_8_5_scaffold_72_6
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6916..7827
DNA (912bp) protein (304aa)
Elongation factor Ts n=1 Tax=Clostridium colicanis 209318 RepID=N9WFZ1_9CLOT
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridi
tsf; elongation factor Ts
NECEvent2014_8_5_scaffold_72_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7898..8611
DNA (714bp) protein (238aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
pyrH; uridylate kinase PyrH (EC:2.7.4.22)
Uridylate kinase n=2 Tax=Clostridium butyricum RepID=M8KCM3_CLOBU
NECEvent2014_8_5_scaffold_72_8
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8622..9179
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TPL3_9CLOT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1196322 species="Bacteria;
frr; ribosome-recycling factor Frr
NECEvent2014_8_5_scaffold_72_9
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9249..10019
DNA (771bp) protein (257aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
uppS; di-trans,poly-cis-decaprenylcistransferase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Clostridium colicanis 209318 RepID=N9XPZ8_9CLOT rbh
NECEvent2014_8_5_scaffold_72_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10068..10829
DNA (762bp) protein (254aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
Phosphatidate cytidylyltransferase n=2 Tax=Clostridium botulinum B RepID=B2TJ45_CLOBB
cytidylyltransferase family protein
NECEvent2014_8_5_scaffold_72_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10916..11881
DNA (966bp) protein (322aa)
Putative membrane protein n=3 Tax=Clostridium botulinum RepID=B2TJ46_CLOBB
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ACD24065.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Ekl
NECEvent2014_8_5_scaffold_72_12
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11901..13061
DNA (1161bp) protein (387aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Clostridium beijerinckii RepID=UPI0003048411
NECEvent2014_8_5_scaffold_72_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13073..14086
DNA (1014bp) protein (338aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
Putative membrane-associated Zn-dependent protease n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TPK9_9CLOT
membrane-associated zinc metalloprotease
NECEvent2014_8_5_scaffold_72_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14101..15150
DNA (1050bp) protein (350aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS0
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H327_9CLOT rbh
NECEvent2014_8_5_scaffold_72_15
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15543..16004
DNA (462bp) protein (154aa)
Ribosome maturation factor RimP n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T3H2_9CLOT
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
rimP; ribosome maturation factor RimP
NECEvent2014_8_5_scaffold_72_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16021..17103
DNA (1083bp) protein (361aa)
Transcription termination/antitermination protein NusA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPL7_CLOSA
nusA; transcription termination/antitermination protein NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_8_5_scaffold_72_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17116..17382
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7M3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98136.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_5_scaffold_72_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17375..17689
DNA (315bp) protein (105aa)
Ribosomal protein L7Ae family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDP6_9CLOT
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
Ribosomal L7Ae/L30e/S12e/Gadd45 family protein {ECO:0000313|EMBL:AIY85196.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_8_5_scaffold_72_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17709..19790
DNA (2082bp) protein (694aa)
Translation initiation factor IF-2 n=1 Tax=Clostridium sp. CAG:221 RepID=R6G589_9CLOT rbh
infB; translation initiation factor IF-2 rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
NECEvent2014_8_5_scaffold_72_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19804..20154
DNA (351bp) protein (117aa)
Ribosome-binding factor A n=2 Tax=Clostridium botulinum E RepID=RBFA_CLOBA
rbfA; ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000313|EMBL:KIL09474.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
NECEvent2014_8_5_scaffold_72_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20156..21127
DNA (972bp) protein (324aa)
Exopolyphosphatase-like enzyme n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U1L3_9CLOT
phosphoesterase domain-containing protein
Exopolyphosphatase-like enzyme {ECO:0000313|EMBL:EKQ53947.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley
NECEvent2014_8_5_scaffold_72_22
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21130..22005
DNA (876bp) protein (292aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) s
truB; tRNA pseudouridine synthase B (EC:5.4.99.-)
tRNA pseudouridine synthase B n=1 Tax=Clostridium sp. DL-VIII RepID=G7LYK4_9CLOT
NECEvent2014_8_5_scaffold_72_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22022..22948
DNA (927bp) protein (309aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=536233 species="Bacteria; Firmicutes;
ribF; bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UX65_CLOBO rbh
NECEvent2014_8_5_scaffold_72_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23069..23332
DNA (264bp) protein (88aa)
30S ribosomal protein S15 n=2 Tax=Clostridium botulinum B RepID=RS15_CLOBB
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
NECEvent2014_8_5_scaffold_72_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23417..25528
DNA (2112bp) protein (704aa)
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000255|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000255|HAMAP-Rule:MF_01595}; Short=PNPase
Polyribonucleotide nucleotidyltransferase n=2 Tax=Clostridium botulinum B RepID=PNP_CLOBB rbh
NECEvent2014_8_5_scaffold_72_26
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25652..26959
DNA (1308bp) protein (436aa)
Zinc protease n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G6U7_CLOPA
Zinc protease {ECO:0000313|EMBL:ETD71402.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
peptidase M16 domain-containing protein
NECEvent2014_8_5_scaffold_72_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27017..27298
DNA (282bp) protein (94aa)
Sporulation protein, YlmC/YmxH family n=2 Tax=Clostridium botulinum E RepID=B2V4H7_CLOBA
PRC-barrel domain-containing protein
Photosystem reaction center subunit H {ECO:0000313|EMBL:KIL09481.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;
NECEvent2014_8_5_scaffold_72_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27316..28512
DNA (1197bp) protein (399aa)
dapG; aspartokinase 1 (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
Aspartokinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHP2_CLOBU
NECEvent2014_8_5_scaffold_72_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28584..29309
DNA (726bp) protein (242aa)
Clp protease n=3 Tax=Clostridium butyricum RepID=B1QUW6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36045.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
peptidase S14, ClpP
NECEvent2014_8_5_scaffold_72_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29390..31762
DNA (2373bp) protein (791aa)
cell division protein FtsK n=1 Tax=Clostridium beijerinckii RepID=UPI0002ED1E22
ftsK/SpoIIIE family protein
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:AIY82298.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sulli
Displaying items 1-30 of 58 in total

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