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NECEvent2014_8_5_scaffold_88

Alias: 178_005_scaffold_88

Search features with annotation key words

Displaying items 31-45 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_88_31
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35186..35377)
DNA (192bp) protein (64aa)
Ferredoxin n=212 Tax=Clostridium difficile RepID=T3H5X5_CLODC
ferredoxin
Ferredoxin {ECO:0000313|EMBL:EQI00012.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
NECEvent2014_8_5_scaffold_88_32
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35447..36283)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XXQ1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ00392.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
cobQ/CobB/MinD/ParA nucleotide binding domain protein
NECEvent2014_8_5_scaffold_88_33
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36309..37142)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U530_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83865.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_8_5_scaffold_88_34
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(37129..37899)
DNA (771bp) protein (257aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=632245
lgt2; prolipoprotein diacylglyceryl transferase 2 (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=3 Tax=Clostridium butyricum RepID=B1R1W5_CLOBU
NECEvent2014_8_5_scaffold_88_35
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37997..38545)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNY8_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41152.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_8_5_scaffold_88_36
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38581..39888)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2THX6_CLOBB
Uncharacterized protein {ECO:0000313|EMBL:KJU71939.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_8_5_scaffold_88_37
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(40007..40855)
DNA (849bp) protein (283aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LPG9_CLOB8
ksgA; dimethyladenosine transferase
NECEvent2014_8_5_scaffold_88_38
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40859..41425)
DNA (567bp) protein (189aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul
Ribonuclease M5 n=1 Tax=Clostridium colicanis 209318 RepID=N9WBK4_9CLOT
putative primase-like protein
NECEvent2014_8_5_scaffold_88_39
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41516..42562)
DNA (1047bp) protein (349aa)
3D/G5 domain protein n=2 Tax=Clostridium botulinum B RepID=B2THX3_CLOBB
3D domain protein {ECO:0000313|EMBL:AIY80696.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
3D/G5 domain protein
NECEvent2014_8_5_scaffold_88_40
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42806..43603)
DNA (798bp) protein (266aa)
Hydrolase, TatD family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAW5_9CLOT
Hydrolase, TatD family {ECO:0000313|EMBL:EKQ56019.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26
TatD family hydrolase
NECEvent2014_8_5_scaffold_88_41
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43729..44172)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q3D6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY22122.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_8_5_scaffold_88_42
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44659..46287)
DNA (1629bp) protein (543aa)
metG2; methionine--tRNA ligase MetG (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MN78_CLOSA
Suspect SCG annotation. See neighboring gene [NECEvent2014_8_5_scaffold_88_43].
NECEvent2014_8_5_scaffold_88_43
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(46440..48371)
DNA (1932bp) protein (644aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
metG; methionine--tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENN3_9CLOT rbh
NECEvent2014_8_5_scaffold_88_44
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48823..49320
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XXQ8_9CLOT
fusaric acid resistance family protein
Fusaric acid resistance family protein {ECO:0000313|EMBL:AIY84683.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii
NECEvent2014_8_5_scaffold_88_45
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49418..49873
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HID0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99405.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
Displaying items 31-45 of 45 in total

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