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NECEvent2014_8_5_scaffold_88

Alias: 178_005_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_88_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38..781)
DNA (744bp) protein (248aa)
Putative membrane protein n=2 Tax=Clostridium botulinum F RepID=A7GCP6_CLOBL
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABS41804.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Lan
NECEvent2014_8_5_scaffold_88_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(782..1654)
DNA (873bp) protein (291aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium botulinum Bf RepID=B1QKT6_CLOBO rbh
ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EEH99333.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_8_5_scaffold_88_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1647..2015)
DNA (369bp) protein (123aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridium botulinum F RepID=A7GCP4_CLOBL
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABS42586.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinu
NECEvent2014_8_5_scaffold_88_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2139..3221)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8Y1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99461.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Xaa-Pro aminopeptidase
NECEvent2014_8_5_scaffold_88_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3337..4035
DNA (699bp) protein (233aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
Metallophosphoesterase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LMA1_9CLOT
phosphodiesterase, family protein
NECEvent2014_8_5_scaffold_88_6
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4108..5634)
DNA (1527bp) protein (509aa)
speE2; spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2N0_CLOA9 rbh
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=11
NECEvent2014_8_5_scaffold_88_7
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5674..6096)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B488_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS79755.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604
NECEvent2014_8_5_scaffold_88_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6112..7236)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z8L0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDP13929.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL
hypothetical protein
NECEvent2014_8_5_scaffold_88_9
unknown

Not on your lists

comp(7252..8235)
DNA (984bp) protein (328aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_88_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8335..8757)
DNA (423bp) protein (141aa)
Cytochrome b5-like Heme/Steroid binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q7L2_9CLOT
cytochrome b5-like Heme/Steroid binding domain protein
Cytochrome b5-like Heme/Steroid binding domain protein {ECO:0000313|EMBL:AIY83311.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
NECEvent2014_8_5_scaffold_88_11
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9148..10542
DNA (1395bp) protein (465aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {EC
asnS; asparagine--tRNA ligase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FR84_9CLOT rbh
NECEvent2014_8_5_scaffold_88_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10587..11249)
DNA (663bp) protein (221aa)
Response regulator receiver domain protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAZ5_FUSMR
tetratricopeptide repeat family protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:AIY84713.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium barati
NECEvent2014_8_5_scaffold_88_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11227..13092)
DNA (1866bp) protein (622aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A4S7_NATTJ rbh
Uncharacterized protein {ECO:0000313|EMBL:KJU70671.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
sensory box protein
NECEvent2014_8_5_scaffold_88_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13113..13805)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEI6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96601.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
kdpE; DNA-binding response regulator KdpE
NECEvent2014_8_5_scaffold_88_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13774..16491)
DNA (2718bp) protein (906aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
kdpD; sensor histidine kinase KdpD (EC:2.7.3.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6D7_9CLOT rbh
NECEvent2014_8_5_scaffold_88_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16507..17100)
DNA (594bp) protein (198aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:M
kdpC; potassium-transporting ATPase subunit C (EC:3.6.3.12)
K+-transporting ATPase, C subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R6_9CLOT rbh
NECEvent2014_8_5_scaffold_88_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17113..19176)
DNA (2064bp) protein (688aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
kdpB; potassium-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2B3_9CLOT rbh
NECEvent2014_8_5_scaffold_88_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19193..20929)
DNA (1737bp) protein (579aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:M
kdpA; potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC28_9CLOT rbh
NECEvent2014_8_5_scaffold_88_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21224..21757)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XL08_9CLOT
carbohydrate binding domain protein
Carbohydrate binding domain protein {ECO:0000313|EMBL:AIY83774.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii st
NECEvent2014_8_5_scaffold_88_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21792..22298)
DNA (507bp) protein (169aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia;
nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUQ1_CLOBO
NECEvent2014_8_5_scaffold_88_21
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22364..23665)
DNA (1302bp) protein (434aa)
Putative ATPase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LVA4_9CLOT
putative ATPase
Putative ATPase {ECO:0000313|EMBL:AGF57055.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4
NECEvent2014_8_5_scaffold_88_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23758..24996)
DNA (1239bp) protein (413aa)
sudA: sulfide dehydrogenase subunit alpha (EC:1.8.-.- 1.18.1.2)
Oxidoreductase n=2 Tax=Clostridium butyricum RepID=B1QZT7_CLOBU
Oxidoreductase {ECO:0000313|EMBL:EEP53992.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.
NECEvent2014_8_5_scaffold_88_23
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25408..27330)
DNA (1923bp) protein (641aa)
Aconitate hydratase, putative, Aquifex type n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TTW8_9CLOT
Aconitate hydratase, putative, Aquifex type {ECO:0000313|EMBL:EKQ56005.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp
aconitate hydratase
NECEvent2014_8_5_scaffold_88_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27360..28523)
DNA (1164bp) protein (388aa)
leuA2; 2-isopropylmalate synthase 2 (EC:2.3.3.13)
Homocitrate synthase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIE0_9CLOT rbh
Trans-homoaconitate synthase {ECO:0000313|EMBL:KJU71949.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_8_5_scaffold_88_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28864..30975)
DNA (2112bp) protein (704aa)
nrdD; anaerobic ribonucleoside-triphosphate reductase NrdD (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase NrdD {ECO:0000313|EMBL:AGX41159.1}; EC=1.17.4.2 {ECO:0000313|EMBL:AGX41159.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
Anaerobic ribonucleoside-triphosphate reductase NrdD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MK16_CLOSA
NECEvent2014_8_5_scaffold_88_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31199..32185
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FPV7_9CLOT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82682.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_8_5_scaffold_88_27
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32218..33258)
DNA (1041bp) protein (347aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EKE9_9FIRM
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI95147.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
diguanylate cyclase
NECEvent2014_8_5_scaffold_88_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33444..34289
DNA (846bp) protein (282aa)
EDD domain protein, DegV family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIZ0_9CLOT rbh
EDD, DegV family domain protein
EDD, DegV family domain protein {ECO:0000313|EMBL:AIY83087.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. S
NECEvent2014_8_5_scaffold_88_29
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34294..34746
DNA (453bp) protein (151aa)
Putative Transcriptional regulator, PadR family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENP8_9CLOT
Putative Transcriptional regulator, PadR family {ECO:0000313|EMBL:CDG02802.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
PadR family transcriptional regulator
NECEvent2014_8_5_scaffold_88_30
unknown

Not on your lists

34810..35007
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying items 1-30 of 45 in total

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