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NECEvent2014_8_5_scaffold_183

Alias: 178_005_scaffold_183

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_183_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1228..2364
DNA (1137bp) protein (379aa)
Glycine betaine/L-proline transport, ATP-binding protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH12_CLOPF rbh
Glycine betaine/L-proline transport, ATP-binding protein {ECO:0000313|EMBL:EDS80943.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
glycine betaine/L-proline transport, ATP-binding protein
NECEvent2014_8_5_scaffold_183_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2357..3910
DNA (1554bp) protein (518aa)
Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTP8_CLOP1 rbh
glycine betaine/L-proline ABC transporter permease/glycine betaine/L-proline-binding protein
Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein {ECO:0000313|EMBL:EIA18289.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
NECEvent2014_8_5_scaffold_183_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4167..4742
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor n=2 Tax=Clostridium perfringens RepID=H7CSZ6_CLOPF rbh
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EIA18290.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262
NECEvent2014_8_5_scaffold_183_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4735..5838
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH15_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS80996.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_8_5_scaffold_183_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6187..7608
DNA (1422bp) protein (474aa)
PTS system, trehalose-specific IIBC component {ECO:0000313|EMBL:EDS81026.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDS81026.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
PTS system, trehalose-specific IIBC component n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH16_CLOPF rbh
PTS system transporter
NECEvent2014_8_5_scaffold_183_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7812..9479
DNA (1668bp) protein (556aa)
Alpha-glucosidase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMX6_CLOPE rbh
Alpha-glucosidase {ECO:0000313|EMBL:BAB80268.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type
alpha-glucosidase
NECEvent2014_8_5_scaffold_183_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9743..10450
DNA (708bp) protein (236aa)
Transcriptional regulator n=4 Tax=Clostridium perfringens RepID=H7CT00_CLOPF rbh
treR; transcriptional regulator
Trehalose operon repressor {ECO:0000313|EMBL:EDT26193.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
NECEvent2014_8_5_scaffold_183_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10902..13067)
DNA (2166bp) protein (722aa)
Stage V sporulation protein D n=3 Tax=Clostridium perfringens RepID=H7CT02_CLOPF rbh
Stage V sporulation protein D {ECO:0000313|EMBL:EIA18296.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
spoVD; stage V sporulation protein D
NECEvent2014_8_5_scaffold_183_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13433..14101
DNA (669bp) protein (223aa)
Probable N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMX3_CLOPE rbh
N-acetylmuramoyl-L-alanine amidase
Probable N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:BAB80271.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_8_5_scaffold_183_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14683..15768
DNA (1086bp) protein (362aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMX2_CLOPE rbh
ribB; riboflavin biosynthesis protein RibD
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_8_5_scaffold_183_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15787..16440
DNA (654bp) protein (218aa)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EDS80976.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EDS80976.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH22_CLOPF rbh
NECEvent2014_8_5_scaffold_183_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16592..17791
DNA (1200bp) protein (400aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIN3_CLOPF rbh
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
ribA; riboflavin biosynthesis protein RibA
NECEvent2014_8_5_scaffold_183_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17897..18379
DNA (483bp) protein (161aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-)
6,7-dimethyl-8-ribityllumazine synthase n=4 Tax=Clostridium perfringens RepID=RISB_CLOPE
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178}; Short=DMRL synthase {ECO:0000255|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000255|HAMAP-Rule:MF_00178};; Short=Lumazine synthase
NECEvent2014_8_5_scaffold_183_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18472..18879)
DNA (408bp) protein (136aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CT08_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18302.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_5_scaffold_183_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19262..19525
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XMW6_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80278.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_183_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19784..22021
DNA (2238bp) protein (746aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMW5_CLOPE rbh
Uncharacterized protein {ECO:0000313|EMBL:BAB80279.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
hypothetical protein
NECEvent2014_8_5_scaffold_183_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22206..23957
DNA (1752bp) protein (584aa)
Sensor histidine kinase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNI5_CLOPF rbh
Sensor histidine kinase {ECO:0000313|EMBL:EIA18306.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
sensor histidine kinase
NECEvent2014_8_5_scaffold_183_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23970..25559
DNA (1590bp) protein (530aa)
DNA-binding response regulator, AraC family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V665_CLOPF rbh
DNA-binding response regulator, AraC family {ECO:0000313|EMBL:EDT70697.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
AraC family transcriptional regulator
NECEvent2014_8_5_scaffold_183_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25712..27097
DNA (1386bp) protein (462aa)
ABC transporter n=4 Tax=Clostridium perfringens RepID=H7CT14_CLOPF rbh
ABC transporter
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDS81063.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_8_5_scaffold_183_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27176..28102
DNA (927bp) protein (309aa)
ABC transporter permease n=6 Tax=Clostridium perfringens RepID=H7CT15_CLOPF rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EDT13923.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
ABC transporter permease
NECEvent2014_8_5_scaffold_183_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28104..28985
DNA (882bp) protein (294aa)
ABC transporter, permease protein n=8 Tax=Clostridium perfringens RepID=H7CT16_CLOPF rbh
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EIA18310.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F
NECEvent2014_8_5_scaffold_183_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29331..30026
DNA (696bp) protein (232aa)
DedA family protein n=9 Tax=Clostridium perfringens RepID=H7CT17_CLOPF rbh
DedA family protein
DedA family protein {ECO:0000313|EMBL:EIA18311.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_5_scaffold_183_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30016..31128
DNA (1113bp) protein (371aa)
Iron-sulfur cluster-binding protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7E6_CLOPF rbh
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EDS81064.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
iron-sulfur binding reductase
NECEvent2014_8_5_scaffold_183_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31291..31878
DNA (588bp) protein (196aa)
CDP-alcohol phosphatidyltransferase family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIM1_CLOPF rbh
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase family protein {ECO:0000313|EMBL:EDT26192.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
NECEvent2014_8_5_scaffold_183_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32164..32796
DNA (633bp) protein (211aa)
Phosphate transport regulator n=10 Tax=Clostridium perfringens RepID=H7CT20_CLOPF rbh
hypothetical protein
Phosphate transport regulator {ECO:0000313|EMBL:EIA18314.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_8_5_scaffold_183_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32789..33787
DNA (999bp) protein (333aa)
Phosphate transporter family protein n=9 Tax=Clostridium perfringens RepID=H7CT21_CLOPF rbh
phosphate transporter family protein
Phosphate transporter family protein {ECO:0000313|EMBL:EDT13909.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
Displaying 26 items

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