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NECEvent2014_8_5_scaffold_211

Alias: 178_005_scaffold_211

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_211_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..508
DNA (507bp) protein (169aa)
UPF0735 ACT domain-containing protein CPE1414 n=8 Tax=Clostridium perfringens RepID=Y1414_CLOPE
hypothetical protein
UPF0735 ACT domain-containing protein CPC_1650 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
NECEvent2014_8_5_scaffold_211_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

681..1835
DNA (1155bp) protein (385aa)
Aminotransferase, class V n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPN9_CLOPF rbh
DegV family protein {ECO:0000313|EMBL:EDT70800.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.
class V aminotransferase
NECEvent2014_8_5_scaffold_211_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1823..2980
DNA (1158bp) protein (386aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein T
Probable tRNA sulfurtransferase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6R0_CLOPF rbh
thiI; thiamine biosynthesis protein ThiI
NECEvent2014_8_5_scaffold_211_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3107..3364
DNA (258bp) protein (86aa)
ErfK/YbiS/YcfS/YnhG family protein n=3 Tax=Clostridium perfringens RepID=B1V5V8_CLOPF
hypothetical protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDT70798.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_5_scaffold_211_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3675..4655)
DNA (981bp) protein (327aa)
Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPN6_CLOPF rbh
RnfABCDGE type electron transport complex subunit D
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
NECEvent2014_8_5_scaffold_211_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4669..5979)
DNA (1311bp) protein (437aa)
Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6Q7_CLOPF rbh
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
RnfABCDGE type electron transport complex subunit C
NECEvent2014_8_5_scaffold_211_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6242..7813
DNA (1572bp) protein (524aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XKI7_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81114.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_211_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7941..8519)
DNA (579bp) protein (193aa)
Flavoredoxin n=9 Tax=Clostridium perfringens RepID=Q0TQJ0_CLOP1 rbh
flavoredoxin
Putative flavin reductase {ECO:0000313|EMBL:ABG85415.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain S
NECEvent2014_8_5_scaffold_211_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8677..9402
DNA (726bp) protein (242aa)
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BNA3_CLOPF rbh
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDS78715.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
N-acetylmuramoyl-L-alanine amidase
NECEvent2014_8_5_scaffold_211_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9652..10803)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BTR8_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT14873.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_8_5_scaffold_211_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10973..11242
DNA (270bp) protein (90aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CWD7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25530.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_8_5_scaffold_211_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11621..14542
DNA (2922bp) protein (974aa)
Protein HypA n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=HYPA_CLOPE rbh
Protein HypA; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
zinc metalloprotease
NECEvent2014_8_5_scaffold_211_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14802..15710
DNA (909bp) protein (303aa)
Exonuclease family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BTR5_CLOPF rbh
DNA polymerase III subunit epsilon
Exonuclease family protein {ECO:0000313|EMBL:EDT14863.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. J
NECEvent2014_8_5_scaffold_211_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15893..16237
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CWD4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81106.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_211_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16248..17531
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKJ5_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81105.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_211_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17582..18289)
DNA (708bp) protein (236aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=451755 species="Bacteria
Purine nucleoside phosphorylase DeoD-type n=7 Tax=Clostridium perfringens RepID=DEOD_CLOPS rbh
deoD; purine nucleoside phosphorylase
NECEvent2014_8_5_scaffold_211_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18482..18745
DNA (264bp) protein (88aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CWD1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14897.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_5_scaffold_211_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18784..20370)
DNA (1587bp) protein (529aa)
DEAD-box ATP dependent DNA helicase n=5 Tax=Clostridium perfringens RepID=H7CWD0_CLOPF rbh
DEAD-box ATP dependent DNA helicase
DEAD-box ATP dependent DNA helicase {ECO:0000313|EMBL:EIA17083.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_5_scaffold_211_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20575..21366
DNA (792bp) protein (264aa)
AP endonuclease, family 2 n=2 Tax=Clostridium perfringens RepID=B1RKP1_CLOPF rbh
AP endonuclease, family 2 {ECO:0000313|EMBL:EDT25472.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
hypothetical protein
NECEvent2014_8_5_scaffold_211_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21490..22776
DNA (1287bp) protein (429aa)
tig; trigger factor (EC:5.2.1.8)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=9 Tax=Clostridium perfringens RepID=TIG_CLOP1 rbh
NECEvent2014_8_5_scaffold_211_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22967..23551
DNA (585bp) protein (195aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000255|HAMAP-Rule:MF_00444}; EC=3.4.21.92 {ECO:0000255|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000255|HAMAP-Rule:MF_00444}; TaxID=195102 spe
ATP-dependent Clp protease proteolytic subunit n=11 Tax=Clostridium perfringens RepID=CLPP_CLOP1 rbh
NECEvent2014_8_5_scaffold_211_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23591..24898
DNA (1308bp) protein (436aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=9 Tax=Clostridium perfringens RepID=CLPX_CLOP1 rbh
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
NECEvent2014_8_5_scaffold_211_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25009..26721
DNA (1713bp) protein (571aa)
Lon-like ATP-dependent protease n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKK3_CLOPE rbh
Lon-like ATP-dependent protease {ECO:0000313|EMBL:BAB81097.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (st
lonB; Lon-like ATP-dependent protease rbh
NECEvent2014_8_5_scaffold_211_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26843..29173
DNA (2331bp) protein (777aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=2 Tax=Clostridium perfringens RepID=Q8XKK4_CLOPE rbh
lonA; ATP-dependent protease La
NECEvent2014_8_5_scaffold_211_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29173..29766
DNA (594bp) protein (198aa)
Probable GTP-binding protein EngB n=8 Tax=Clostridium perfringens RepID=ENGB_CLOP1 rbh
engB; ribosome biogenesis GTP-binding protein YsxC
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_8_5_scaffold_211_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29983..30444
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXM4_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT13553.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_8_5_scaffold_211_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30480..30695
DNA (216bp) protein (72aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CWC1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25473.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_8_5_scaffold_211_28
unknown

Not on your lists

30661..30858
DNA (198bp) protein (66aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_211_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31054..31620
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXM6_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT13542.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
Displaying 29 items

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