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NECEvent2014_8_5_scaffold_216

Alias: 178_005_scaffold_216

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_216_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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186..1205
DNA (1020bp) protein (340aa)
Putative transcriptional regulator n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTH5_CLOP1 rbh
transcriptional regulator
Probable PBP5 synthesis regulator protein {ECO:0000313|EMBL:BAB80337.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
NECEvent2014_8_5_scaffold_216_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1324..2616
DNA (1293bp) protein (431aa)
Cell wall binding repeat protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBV2_CLOPF rbh
Cell wall binding repeat protein {ECO:0000313|EMBL:EDT22291.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B
cell wall binding repeat-containing protein
NECEvent2014_8_5_scaffold_216_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2735..3418)
DNA (684bp) protein (228aa)
Nucleotidyl transferase family protein n=2 Tax=Clostridium perfringens RepID=Q0TTH7_CLOP1 rbh
licC; lic-1 operon protein
Probable lic-1 operon protein {ECO:0000313|EMBL:BAB80335.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_8_5_scaffold_216_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3565..4533)
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNC1_CLOPF rbh
Lic-1 operon protein {ECO:0000313|EMBL:EIA17870.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
licB; lic-1 operon protein
NECEvent2014_8_5_scaffold_216_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4559..6427)
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNC0_CLOPF rbh
Transcriptional regulator, MarR family/choline/ethanolamine kinase {ECO:0000313|EMBL:EDT14534.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
licA; choline kinase
NECEvent2014_8_5_scaffold_216_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6632..7996)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMR2_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80332.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_216_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8198..9850)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMR3_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80331.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_216_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9980..12403)
DNA (2424bp) protein (808aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNB5_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:BAB80330.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
hypothetical protein
NECEvent2014_8_5_scaffold_216_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12425..13876)
DNA (1452bp) protein (484aa)
Polysaccharide biosynthesis protein n=2 Tax=Clostridium perfringens RepID=B1BF15_CLOPF rbh
capsular polysaccharide synthesis protein
Probable capsular polysaccharide synthesis protein {ECO:0000313|EMBL:BAB80329.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
NECEvent2014_8_5_scaffold_216_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13885..14625)
DNA (741bp) protein (247aa)
Conserved domain protein n=5 Tax=Clostridium perfringens RepID=Q0TTI4_CLOP1 rbh
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EDT22332.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATC
NECEvent2014_8_5_scaffold_216_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14719..15567)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNB2_CLOPF rbh
glycosyl transferase family protein
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EDT22329.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
NECEvent2014_8_5_scaffold_216_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15564..16778)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XMR8_CLOPE rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT22327.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. AT
NECEvent2014_8_5_scaffold_216_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16803..17852)
DNA (1050bp) protein (350aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=3 Tax=Clostridium perfringens RepID=B1BF11_CLOPF rbh
NECEvent2014_8_5_scaffold_216_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17880..18764)
DNA (885bp) protein (295aa)
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium perfringens F262 RepID=H7CT57_CLOPF rbh
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIA17859.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F2
NECEvent2014_8_5_scaffold_216_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18778..19347)
DNA (570bp) protein (190aa)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EDT27840.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EDT27840.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=5 Tax=Clostridium perfringens RepID=H7CT56_CLOPF rbh
NECEvent2014_8_5_scaffold_216_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19453..20334)
DNA (882bp) protein (294aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
Glucose-1-phosphate thymidylyltransferase n=2 Tax=Clostridium perfringens RepID=Q0TTJ0_CLOP1 rbh
rfbA; glucose-1-phosphate thymidylyltransferase
NECEvent2014_8_5_scaffold_216_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20385..21296)
DNA (912bp) protein (304aa)
Glycosyl transferase, group 2 family protein n=3 Tax=Clostridium perfringens RepID=H7CT54_CLOPF rbh
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EIA17856.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
glycosyl transferase family protein
NECEvent2014_8_5_scaffold_216_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21297..21959)
DNA (663bp) protein (221aa)
Sugar transferase family protein n=6 Tax=Clostridium perfringens RepID=H7CT53_CLOPF rbh
sugar transferase
Probable undecaprenyl phosphate galactosephosphotransferase {ECO:0000313|EMBL:BAB80320.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_8_5_scaffold_216_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22000..22800)
DNA (801bp) protein (267aa)
Phosphatase YidA {ECO:0000313|EMBL:EDT14509.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDT14509.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
HAD family hydrolase n=7 Tax=Clostridium perfringens RepID=H7CT52_CLOPF rbh
HAD family hydrolase
NECEvent2014_8_5_scaffold_216_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23176..23781
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CT51_CLOPF rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAB80318.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_216_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23995..25590
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 n=10 Tax=Clostridium perfringens RepID=H7CT50_CLOPF rbh
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia;
NECEvent2014_8_5_scaffold_216_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25852..29178
DNA (3327bp) protein (1109aa)
Membrane protein, MmpL family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUT9_CLOPF rbh
Membrane protein, MmpL family {ECO:0000313|EMBL:EDT14525.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str
hypothetical protein
NECEvent2014_8_5_scaffold_216_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29383..30222)
DNA (840bp) protein (280aa)
HAD hydrolase, IIB family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSU0_CLOPF rbh
HAD family hydrolase
Uncharacterized protein {ECO:0000313|EMBL:BAB80315.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_216_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30614..30808
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SVE5_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86116.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
Displaying 24 items

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