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NECEvent2014_8_5_scaffold_340

Alias: 178_005_scaffold_340

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_340_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..205
DNA (204bp) protein (68aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1R8B2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18495.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_5_scaffold_340_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(384..1199)
DNA (816bp) protein (272aa)
Mechanosensitive ion channel family protein n=9 Tax=Clostridium perfringens RepID=H7CS07_CLOPF rbh
mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EIA18496.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_8_5_scaffold_340_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1773..2417)
DNA (645bp) protein (215aa)
heme oxygenase 2 (EC:1.14.99.3)
Heme oxygenase {ECO:0000313|EMBL:ABG86403.1}; EC=1.14.99.3 {ECO:0000313|EMBL:ABG86403.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
Heme oxygenase 2 n=6 Tax=Clostridium perfringens RepID=H7CS08_CLOPF rbh
NECEvent2014_8_5_scaffold_340_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2818..4041
DNA (1224bp) protein (408aa)
Putative nuclease SbcCD, D subunit n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH58_CLOPF rbh
Putative nuclease SbcCD, D subunit {ECO:0000313|EMBL:EDS80825.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
nuclease SbcCD subunit D
NECEvent2014_8_5_scaffold_340_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4019..7546
DNA (3528bp) protein (1176aa)
Probable exonuclease n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNW6_CLOPE rbh
sbcC; exonuclease SbcC
Probable exonuclease {ECO:0000313|EMBL:BAB79922.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / T
NECEvent2014_8_5_scaffold_340_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7946..9142
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia;
ackA; acetate kinase (EC:2.7.2.1)
Acetate kinase n=3 Tax=Clostridium perfringens RepID=B1BH60_CLOPF rbh
NECEvent2014_8_5_scaffold_340_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9578..10399
DNA (822bp) protein (274aa)
DnaJ-related protein n=2 Tax=Clostridium perfringens RepID=Q8XNW4_CLOPE rbh
DnaJ-like protein
DnaJ domain protein {ECO:0000313|EMBL:EDT26592.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.
NECEvent2014_8_5_scaffold_340_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10650..11408)
DNA (759bp) protein (253aa)
Transcriptional regulator, AraC family n=6 Tax=Clostridium perfringens RepID=Q0TUL8_CLOP1 rbh
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDS80868.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_8_5_scaffold_340_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11495..12085
DNA (591bp) protein (197aa)
Cell wall anchor domain protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH62_CLOPF
Cell wall anchor domain protein {ECO:0000313|EMBL:EDS80862.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C s
cell wall anchor domain-containing protein
NECEvent2014_8_5_scaffold_340_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12189..13919
DNA (1731bp) protein (577aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUG1_CLOPF rbh
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EDT14638.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
multidrug resistance protein 1
NECEvent2014_8_5_scaffold_340_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13920..15608
DNA (1689bp) protein (563aa)
ABC transporter, permease/ATP-binding protein n=3 Tax=Clostridium perfringens RepID=B1BUG2_CLOPF rbh
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EDT71973.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
ABC transporter ATP-binding/permease
NECEvent2014_8_5_scaffold_340_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15595..15990
DNA (396bp) protein (132aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q0SWE8_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14657.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_5_scaffold_340_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15965..16270
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUK8_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87450.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_8_5_scaffold_340_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16397..16582
DNA (186bp) protein (62aa)
Iron-sulfur cluster-binding protein n=7 Tax=Clostridium perfringens RepID=Q0SWE4_CLOPS
iron-sulfur cluster-binding protein
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EDT26642.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_5_scaffold_340_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16897..18342
DNA (1446bp) protein (482aa)
Arylsulfatase; EC=3.1.6.1;; Cys-type sulfatase; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type
Arylsulfatase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=SULF_CLOPE rbh
arylsulfatase
NECEvent2014_8_5_scaffold_340_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18500..19837)
DNA (1338bp) protein (446aa)
Glycerol-3-phosphate transporter n=3 Tax=Clostridium perfringens RepID=Q8XNV0_CLOPE rbh
glpT; glycerol-3-phosphate transporter
Putative glycerol-3-phosphate transporter {ECO:0000313|EMBL:EDT26584.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
NECEvent2014_8_5_scaffold_340_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20038..21057)
DNA (1020bp) protein (340aa)
Putative iron compound ABC transporter, iron compound-binding protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRR3_CLOPF rbh
iron(III) ABC transporter
Probable iron(III) ABC transporter {ECO:0000313|EMBL:BAB79939.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_5_scaffold_340_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21038..21826)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRR2_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS80873.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_8_5_scaffold_340_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21819..23249)
DNA (1431bp) protein (477aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
sensor histidine kinase (EC:2.7.3.-)
Sensor histidine kinase n=3 Tax=Clostridium perfringens RepID=B1BUH0_CLOPF rbh
NECEvent2014_8_5_scaffold_340_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23239..23910)
DNA (672bp) protein (224aa)
DNA-binding response regulator n=6 Tax=Clostridium perfringens RepID=Q0TUK1_CLOP1 rbh
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:EDT14643.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
Displaying 20 items

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