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NECEvent2014_8_5_scaffold_353

Alias: 178_005_scaffold_353

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_353_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(250..684)
DNA (435bp) protein (145aa)
Hemoglobin n=8 Tax=Clostridium perfringens RepID=H7CXY0_CLOPF
hemoglobin
Bacterial hemoglobin {ECO:0000313|EMBL:BAB81659.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / T
NECEvent2014_8_5_scaffold_353_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1110..1847)
DNA (738bp) protein (246aa)
Probable transcriptional regulatory protein CPR_1922 n=10 Tax=Clostridium perfringens RepID=Y1922_CLOPS rbh
hypothetical protein
Probable transcriptional regulatory protein CPE1954 {ECO:0000255|HAMAP-Rule:MF_00693}; Hyp27; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
NECEvent2014_8_5_scaffold_353_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1973..2626)
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XJ08_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81661.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_353_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2632..4038)
DNA (1407bp) protein (469aa)
Transcriptional regulator, GntR family/aminotransferase n=2 Tax=Clostridium perfringens RepID=B1RHI9_CLOPF rbh
Transcriptional regulator, GntR family/aminotransferase {ECO:0000313|EMBL:EDT26545.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
GntR family transcriptional regulator
NECEvent2014_8_5_scaffold_353_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4053..4982)
DNA (930bp) protein (310aa)
Nucleotidyltransferase domain protein n=4 Tax=Clostridium perfringens RepID=H7CXY4_CLOPF rbh
nucleotidyltransferase domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81663.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_353_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4997..5470)
DNA (474bp) protein (158aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CXY5_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16499.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_5_scaffold_353_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5602..7395)
DNA (1794bp) protein (598aa)
GTPase HflX n=3 Tax=Clostridium perfringens RepID=Q0TP01_CLOP1 rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
GTP binding protein
NECEvent2014_8_5_scaffold_353_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7502..8026
DNA (525bp) protein (175aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=9 Tax=Clostridium perfringens RepID=H7CXY7_CLOPF rbh
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EIA16501.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_8_5_scaffold_353_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8060..8749)
DNA (690bp) protein (230aa)
Sporulation protein YunB n=8 Tax=Clostridium perfringens RepID=H7CXY8_CLOPF rbh
sporulation protein YunB
Sporulation protein YunB {ECO:0000313|EMBL:EDT25259.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATC
NECEvent2014_8_5_scaffold_353_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8886..11378
DNA (2493bp) protein (831aa)
Penicillin-binding protein, 1A family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHI3_CLOPF rbh
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:EDT26551.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
1A family penicillin-binding protein
NECEvent2014_8_5_scaffold_353_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11672..13072
DNA (1401bp) protein (467aa)
Sodium:alanine symporter family protein n=7 Tax=Clostridium perfringens RepID=H7CXZ0_CLOPF rbh
sodium:alanine symporter family protein
Sodium:alanine symporter family protein {ECO:0000313|EMBL:EDS80292.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_8_5_scaffold_353_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13109..13501)
DNA (393bp) protein (131aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XIZ8_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27823.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_8_5_scaffold_353_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13549..14514)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XIZ7_CLOPE rbh
acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:BAB81672.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_353_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14951..15490
DNA (540bp) protein (180aa)
DNA-binding protein n=10 Tax=Clostridium perfringens RepID=H7CXZ3_CLOPF rbh
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:EDT72747.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.
NECEvent2014_8_5_scaffold_353_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15522..16571
DNA (1050bp) protein (350aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostri
Spermidine/putrescine ABC transporter, ATP-binding protein n=6 Tax=Clostridium perfringens RepID=H7CXZ4_CLOPF rbh
potA; spermidine/putrescine ABC transporter ATP-binding protein
NECEvent2014_8_5_scaffold_353_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16574..17419
DNA (846bp) protein (282aa)
Spermidine/putrescine ABC transporter, permease protein PotB n=8 Tax=Clostridium perfringens RepID=H7CXZ5_CLOPF rbh
potB; spermidine/putrescine ABC transporter permease PotB
Spermidine/putrescine ABC transporter, permease protein PotB {ECO:0000313|EMBL:EIA16450.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_8_5_scaffold_353_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17413..18213
DNA (801bp) protein (267aa)
Spermidine/putrescine ABC transporter, permease protein PotC n=4 Tax=Clostridium perfringens RepID=Q0TNZ1_CLOP1 rbh
potC; spermidine/putrescine ABC transporter permease PotC
Spermidine/putrescine ABC transporter, permease protein PotC {ECO:0000313|EMBL:EDT16328.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_8_5_scaffold_353_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18215..19297
DNA (1083bp) protein (361aa)
Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein n=4 Tax=Clostridium perfringens RepID=H7CXZ7_CLOPF rbh
Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein {ECO:0000313|EMBL:EIA16452.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
potD; spermidine/putrescine ABC transporter spermidine/putrescine-binding protein
NECEvent2014_8_5_scaffold_353_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19332..19763)
DNA (432bp) protein (144aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
Nucleoside diphosphate kinase n=9 Tax=Clostridium perfringens RepID=NDK_CLOP1
ndk; nucleoside diphosphate kinase
NECEvent2014_8_5_scaffold_353_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19948..20217
DNA (270bp) protein (90aa)
Acylphosphatase n=5 Tax=Clostridium perfringens RepID=ACYP_CLOP1
acylphosphatase
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
NECEvent2014_8_5_scaffold_353_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20357..20512)
DNA (156bp) protein (52aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CY00_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16259.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_5_scaffold_353_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20680..21246)
DNA (567bp) protein (189aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1BPV3_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16252.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_5_scaffold_353_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21425..22696
DNA (1272bp) protein (424aa)
D-alanyl-D-alanine carboxypeptidase family protein n=4 Tax=Clostridium perfringens RepID=H7CY02_CLOPF rbh
dacF; D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:EIA16457.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
NECEvent2014_8_5_scaffold_353_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22751..23395)
DNA (645bp) protein (215aa)
pyrophosphatase PpaX (EC:3.6.1.1)
HAD-superfamily hydrolase, subfamily IA n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REG0_CLOPF rbh
HAD-superfamily hydrolase, subfamily IA {ECO:0000313|EMBL:EDT27647.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
Displaying 24 items

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