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NECEvent2014_8_5_scaffold_373

Alias: 178_005_scaffold_373

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_373_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(43..1791)
DNA (1749bp) protein (583aa)
Dihydroxyacetone kinase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXD3_CLOPF rbh
Dihydroxyacetone kinase family protein {ECO:0000313|EMBL:EDT13628.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
dihydroxyacetone kinase
NECEvent2014_8_5_scaffold_373_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1817..2947)
DNA (1131bp) protein (377aa)
gldA; glycerol dehydrogenase (EC:1.1.1.6)
Glycerol dehydrogenase {ECO:0000313|EMBL:EDT13627.1}; EC=1.1.1.6 {ECO:0000313|EMBL:EDT13627.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
Glycerol dehydrogenase n=9 Tax=Clostridium perfringens RepID=H7CRP6_CLOPF rbh
NECEvent2014_8_5_scaffold_373_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3567..3875
DNA (309bp) protein (103aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CRP5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13647.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_5_scaffold_373_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4283..5419)
DNA (1137bp) protein (379aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EDT13634.1}; EC=1.3.8.1 {ECO:0000313|EMBL:EDT13634.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
Acyl-CoA dehydrogenase n=7 Tax=Clostridium perfringens RepID=Q8XP68_CLOPE rbh
acdS; acyl-CoA dehydrogenase
NECEvent2014_8_5_scaffold_373_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5523..7073)
DNA (1551bp) protein (517aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
propionate CoA-transferase (EC:2.8.3.1)
Acetate CoA-transferase YdiF n=1 Tax=Clostridium perfringens F262 RepID=H7CRP3_CLOPF rbh
NECEvent2014_8_5_scaffold_373_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7176..7952)
DNA (777bp) protein (259aa)
Crotonase n=5 Tax=Clostridium perfringens RepID=Q8XP70_CLOPE rbh
crotonase
Crotonase {ECO:0000313|EMBL:BAB79801.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
NECEvent2014_8_5_scaffold_373_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8183..8941)
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XP71_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79800.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_373_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9313..10362)
DNA (1050bp) protein (350aa)
Oxidoreductase, Gfo/Idh/MocA family n=2 Tax=Clostridium perfringens RepID=B1RJY6_CLOPF rbh
dehydrogenase
Probable dehydrogenase {ECO:0000313|EMBL:BAB79799.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 /
NECEvent2014_8_5_scaffold_373_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10449..12038)
DNA (1590bp) protein (530aa)
Na+/myo-inositol cotransporter n=2 Tax=Clostridium perfringens RepID=Q8XP73_CLOPE rbh
Sodium/solute symporter family protein {ECO:0000313|EMBL:EDT25738.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
symporter YidK
NECEvent2014_8_5_scaffold_373_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12120..13013)
DNA (894bp) protein (298aa)
Inosose dehydratase {ECO:0000256|HAMAP-Rule:MF_01672}; EC=4.2.1.44 {ECO:0000256|HAMAP-Rule:MF_01672};; 2-keto-myo-inositol dehydratase {ECO:0000256|HAMAP-Rule:MF_01672}; TaxID=451756 species="Bacteria
Inosose dehydratase n=3 Tax=Clostridium perfringens RepID=IOLE_CLOPE rbh
iolE; myo-inositol catabolism protein
NECEvent2014_8_5_scaffold_373_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13132..14133)
DNA (1002bp) protein (334aa)
myo-inositol 2-dehydrogenase (EC:1.1.1.18)
Myo-inositol 2-dehydrogenase {ECO:0000313|EMBL:EDT71268.1}; EC=1.1.1.18 {ECO:0000313|EMBL:EDT71268.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
Myo-inositol 2-dehydrogenase n=9 Tax=Clostridium perfringens RepID=Q0TUZ1_CLOP1 rbh
NECEvent2014_8_5_scaffold_373_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14209..16128)
DNA (1920bp) protein (640aa)
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase {ECO:0000255|HAMAP-Rule:MF_01669}; Short=THcHDO hydrolase {ECO:0000255|HAMAP-Rule:MF_01669};; EC=3.7.1.22 {ECO:0000255|HAMAP-Rule:MF_01669};; TaxID
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase n=2 Tax=Clostridium perfringens RepID=IOLD_CLOPE rbh
iolD; myo-inositol catabolism protein
NECEvent2014_8_5_scaffold_373_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16145..16912)
DNA (768bp) protein (256aa)
Myo-inositol catabolism protein n=8 Tax=Clostridium perfringens RepID=H7CRN5_CLOPF rbh
iolB; myo-inositol catabolism protein
Myo-inositol catabolism protein {ECO:0000313|EMBL:EIA18667.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F26
NECEvent2014_8_5_scaffold_373_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16926..17942)
DNA (1017bp) protein (339aa)
5-dehydro-2-deoxygluconokinase {ECO:0000256|HAMAP-Rule:MF_01668}; EC=2.7.1.92 {ECO:0000256|HAMAP-Rule:MF_01668};; 2-deoxy-5-keto-D-gluconate kinase {ECO:0000256|HAMAP-Rule:MF_01668}; TaxID=883064 spec
5-dehydro-2-deoxygluconokinase n=7 Tax=Clostridium perfringens RepID=IOLC_CLOP1 rbh
myo-inositol catabolism protein IolC
NECEvent2014_8_5_scaffold_373_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17956..18801)
DNA (846bp) protein (282aa)
alf1; fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=5 Tax=Clostridium perfringens RepID=H7CRN3_CLOPF rbh
Fructose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:BAB79792.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_5_scaffold_373_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18808..19962)
DNA (1155bp) protein (385aa)
Alcohol dehydrogenase, iron-containing n=7 Tax=Clostridium perfringens RepID=Q0TUZ6_CLOP1 rbh
alcohol dehydrogenase
Alcohol dehydrogenase, iron-containing {ECO:0000313|EMBL:EDT71252.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_8_5_scaffold_373_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20444..21214
DNA (771bp) protein (257aa)
Transcription repressor of myo-inositol catabolism operon n=7 Tax=Clostridium perfringens RepID=Q8XP81_CLOPE rbh
iolR; transcription repressor of myo-inositol catabolism operon
Putative transcriptional regulator IolR {ECO:0000313|EMBL:EDT13636.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_8_5_scaffold_373_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21573..22196)
DNA (624bp) protein (208aa)
Phosphoglycerate mutase family protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V4G7_CLOPF rbh
phosphoglycerate mutase
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EDT71265.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_8_5_scaffold_373_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22528..22680)
DNA (153bp) protein (51aa)
Rubredoxin/rubrerythrin n=4 Tax=Clostridium perfringens RepID=H7CRM9_CLOPF
rubredoxin/rubrerythrin
Uncharacterized protein {ECO:0000313|EMBL:EIA15752.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 19 items

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