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NECEvent2014_8_5_scaffold_381

Alias: 178_005_scaffold_381

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_381_1
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33..527)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WJ45_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03111.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
NUDIX family hydrolase
NECEvent2014_8_5_scaffold_381_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(581..1273)
DNA (693bp) protein (231aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Clostridium sp. CAG:221 RepID=R6FYU6_9CLOT rbh
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
sfsA; sugar fermentation stimulation protein A
NECEvent2014_8_5_scaffold_381_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1700..2023
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NA92_9CLOT
transcriptional regulator PadR-like family protein
Transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:AIY83709.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_8_5_scaffold_381_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2025..2702
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F6F3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG00608.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_8_5_scaffold_381_5
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2702..3634
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G0Q2_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:ETD69995.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-59
hypothetical protein
NECEvent2014_8_5_scaffold_381_6
unknown

Not on your lists

comp(3666..4085)
DNA (420bp) protein (140aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_381_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4183..4866)
DNA (684bp) protein (228aa)
Probable N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZA9_CLOBA
N-acetylmuramoyl-L-alanine amidase family protein
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:AIY84659.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
NECEvent2014_8_5_scaffold_381_8
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4909..5355)
DNA (447bp) protein (149aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Methionine sulfoxide reductase B n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G0B3_CLOPA
methionine sulfoxide reductase B
NECEvent2014_8_5_scaffold_381_9
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

5445..6977
DNA (1533bp) protein (511aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=GWF2_Clostridiales_36_10_curated
apolipoprotein N-acyltransferase
NECEvent2014_8_5_scaffold_381_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7015..7920)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96649.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative ATPase, BadF/BadG/BcrA/BcrD type
NECEvent2014_8_5_scaffold_381_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7930..9021)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEP5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96648.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_5_scaffold_381_12
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9009..10268)
DNA (1260bp) protein (420aa)
PTS system, lactose/cellobiose-specific IIC component n=2 Tax=Erysipelothrix rhusiopathiae RepID=F5WTW8_ERYRF
PTS system transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=650150 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix
NECEvent2014_8_5_scaffold_381_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10269..11423)
DNA (1155bp) protein (385aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKW2_9CLOT rbh
anmK; anhydro-N-acetylmuramic acid kinase
NECEvent2014_8_5_scaffold_381_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11479..12378)
DNA (900bp) protein (300aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMA
murQ; N-acetylmuramic acid 6-phosphate etherase MurQ (EC:4.2.1.126)
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBK7_9FIRM rbh
NECEvent2014_8_5_scaffold_381_15
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12421..13455)
DNA (1035bp) protein (345aa)
membrane protein n=1 Tax=Erysipelothrix tonsillarum RepID=UPI000374BBB7 rbh
outer surface protein
Uncharacterized protein {ECO:0000313|EMBL:BAK31905.1}; TaxID=650150 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix r
NECEvent2014_8_5_scaffold_381_16
Lactobacillus shenzhenensis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13468..14754)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Lactobacillus shenzhenensis LY-73 RepID=U4TZI5_9LACO rbh
PTS system lactose/cellobiose-specific transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1231336 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus shenzhenensis LY
NECEvent2014_8_5_scaffold_381_17
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

comp(14924..15976)
DNA (1053bp) protein (351aa)
Beta-lactamase family protein n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XEE5_9FIRM rbh
Beta-lactamase family protein {ECO:0000313|EMBL:CDD21983.1}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
beta-lactamase family protein
NECEvent2014_8_5_scaffold_381_18
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16100..16318
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Erysipelothrix tonsillarum RepID=UPI00037BF49D
Uncharacterized protein {ECO:0000313|EMBL:EFY09593.1}; TaxID=525280 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix r
hypothetical protein
NECEvent2014_8_5_scaffold_381_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16394..17230)
DNA (837bp) protein (279aa)
Putative Transcriptional regulator, RpiR family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EWZ4_9CLOT
Putative Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CDG00751.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
RpiR family phosphosugar-binding transcriptional regulator
NECEvent2014_8_5_scaffold_381_20
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17301..18476)
DNA (1176bp) protein (392aa)
Sodium/proton antiporter, CPA1 family (TC 2.A.36) n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QPG8_ACEAZ rbh
sodium/proton antiporter
Sodium/proton antiporter, CPA1 family (TC 2.A.36) {ECO:0000313|EMBL:ADL12409.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="A
NECEvent2014_8_5_scaffold_381_21
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18634..19536)
DNA (903bp) protein (301aa)
Cation efflux family protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G629_9CLOT
Cation efflux family protein {ECO:0000313|EMBL:CDB16964.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostr
cation efflux family protein
NECEvent2014_8_5_scaffold_381_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19721..20455)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96625.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlett
hypothetical protein
NECEvent2014_8_5_scaffold_381_23
unknown

Not on your lists

20575..20874
DNA (300bp) protein (100aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_381_24
unknown

Not on your lists

21019..21345
DNA (327bp) protein (109aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_381_25
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21444..22346)
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24T09_DESHY rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE84833.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium
Displaying 25 items

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