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NECEvent2014_8_5_scaffold_390

Alias: 178_005_scaffold_390

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_390_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(149..1924)
DNA (1776bp) protein (592aa)
von Willebrand factor type A domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTT9_CLOP1 rbh
von Willebrand factor A
Uncharacterized protein {ECO:0000313|EMBL:KJU72111.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_8_5_scaffold_390_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1943..2662)
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTU0_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80894.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
NECEvent2014_8_5_scaffold_390_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2686..3384)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTU1_CLOP1 rbh
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ABG87048.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM
NECEvent2014_8_5_scaffold_390_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3432..4067)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNC2_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16690.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_8_5_scaffold_390_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4122..4646)
DNA (525bp) protein (175aa)
Signal peptidase I {ECO:0000313|EMBL:EDT24946.1}; EC=3.4.21.89 {ECO:0000313|EMBL:EDT24946.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
Signal peptidase I n=2 Tax=Clostridium perfringens RepID=B1R3T3_CLOPF rbh
signal peptidase type I
NECEvent2014_8_5_scaffold_390_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4885..5634
DNA (750bp) protein (250aa)
Sortase B n=2 Tax=Clostridium perfringens RepID=B1BNC4_CLOPF rbh
Sortase B {ECO:0000313|EMBL:EDT16651.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
sortase
NECEvent2014_8_5_scaffold_390_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5782..7986)
DNA (2205bp) protein (735aa)
Alpha-galactosidase {ECO:0000313|EMBL:EDT27848.1}; EC=3.2.1.22 {ECO:0000313|EMBL:EDT27848.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
Alpha-galactosidase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDD7_CLOPF rbh
agaN; alpha-galactosidase
NECEvent2014_8_5_scaffold_390_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8409..13100)
DNA (4692bp) protein (1564aa)
Cell wall binding repeat domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTU6_CLOP1 rbh
cell wall binding repeat-containing protein
Cell wall binding repeat-containing protein {ECO:0000313|EMBL:EIA18241.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_8_5_scaffold_390_9
unknown

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comp(13192..13341)
DNA (150bp) protein (50aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_390_trna_1
unknown

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comp(13464..13536)
DNA (73bp)
transferRNA
NECEvent2014_8_5_scaffold_390_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13680..14372)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNQ0_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16734.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_8_5_scaffold_390_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14706..15650)
DNA (945bp) protein (315aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=451756 s
UTP-glucose-1-phosphate uridylyltransferase n=6 Tax=Clostridium perfringens RepID=H7CSU4_CLOPF rbh
galF; UTP-glucose-1-phosphate uridylyltransferase
NECEvent2014_8_5_scaffold_390_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15932..16948)
DNA (1017bp) protein (339aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EDT16704.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EDT16704.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
UDP-glucose 4-epimerase n=2 Tax=Clostridium perfringens RepID=B1BNG0_CLOPF rbh
galE; UDP-glucose 4-epimerase
NECEvent2014_8_5_scaffold_390_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17026..19269)
DNA (2244bp) protein (748aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN30_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80214.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_390_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19690..20337)
DNA (648bp) protein (216aa)
Putative RNA polymerase sigma factor n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNQ4_CLOPF rbh
RNA polymerase sigma factor
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:EDT16803.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
NECEvent2014_8_5_scaffold_390_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20705..21625)
DNA (921bp) protein (307aa)
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=445334 s
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTV2_CLOP1 rbh
NECEvent2014_8_5_scaffold_390_16
unknown

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comp(21740..21832)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 17 items

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