ggKbase home page

NECEvent2014_8_5_scaffold_444

Alias: 178_005_scaffold_444

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_444_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37..453
DNA (417bp) protein (139aa)
Putative transcriptional regulator, MarR family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS56_CLOPF
Putative transcriptional regulator, MarR family {ECO:0000313|EMBL:EDT15448.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
MarR family transcriptional regulator
NECEvent2014_8_5_scaffold_444_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

931..1803
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4V6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99702.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
penicillin-binding protein 1
NECEvent2014_8_5_scaffold_444_3
unknown

Not on your lists

1872..2720
DNA (849bp) protein (283aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_444_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3230..4264
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CRU0_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA18580.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_8_5_scaffold_444_5
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4417..4695
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E9D3_GEOLS
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
NECEvent2014_8_5_scaffold_444_6
unknown

Not on your lists

4665..4793
DNA (129bp) protein (43aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_444_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5260..5421)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWM5_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86297.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_8_5_scaffold_444_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5532..6107
DNA (576bp) protein (192aa)
BRO family, N-terminal domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWM4_CLOPS rbh
BRO domain-containing protein rbh
BRO family, N-terminal domain protein {ECO:0000313|EMBL:ABG87126.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_8_5_scaffold_444_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6635..7186
DNA (552bp) protein (184aa)
Probable RNA 2'-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000255|HAMAP-Rule:MF_00299};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
Probable RNA 2'-phosphotransferase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQV6_CLOPF rbh
RNA 2'-phosphotransferase-like protein
NECEvent2014_8_5_scaffold_444_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7477..8322
DNA (846bp) protein (282aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CRU3_CLOPF rbh
hypothetical protein
Glucuronate isomerase {ECO:0000313|EMBL:EDT15529.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS198
NECEvent2014_8_5_scaffold_444_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8351..9376
DNA (1026bp) protein (342aa)
2-keto-3-deoxygluconate kinase n=6 Tax=Clostridium perfringens RepID=Q8XP20_CLOPE rbh
2-keto-3-deoxygluconate kinase
2-keto-3-deoxygluconate kinase {ECO:0000313|EMBL:EDT15461.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
NECEvent2014_8_5_scaffold_444_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9440..11239
DNA (1800bp) protein (600aa)
Beta-glucuronidase (GUS) (Beta-D-glucuronosideglucuronosohydrolase) {ECO:0000313|EMBL:EDS79686.1}; EC=3.2.1.31 {ECO:0000313|EMBL:EDS79686.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; C
Beta-glucuronidase (GUS) (Beta-D-glucuronosideglucuronosohydrolase) n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKI8_CLOPF rbh
bglR; beta-D-glucuronidase
NECEvent2014_8_5_scaffold_444_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11382..12071
DNA (690bp) protein (230aa)
Probable transcriptional regulator n=7 Tax=Clostridium perfringens RepID=Q8XP18_CLOPE rbh
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB79854.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_5_scaffold_444_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12261..13112
DNA (852bp) protein (284aa)
D-mannonate oxidoreductase (EC:1.1.1.131)
D-mannonate oxidoreductase n=5 Tax=Clostridium perfringens RepID=H7CRU7_CLOPF rbh
D-mannonate oxidoreductase {ECO:0000313|EMBL:EDS79657.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. J
NECEvent2014_8_5_scaffold_444_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13127..13735
DNA (609bp) protein (203aa)
2-dehydro-3-deoxyphosphogluconate/4-hydroxy-2-oxoglutarate aldolase n=4 Tax=Clostridium perfringens RepID=Q8XP16_CLOPE rbh
2-dehydro-3-deoxyphosphogluconate aldolase
2-dehydro-3-deoxyphosphogluconate/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:BAB79856.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
NECEvent2014_8_5_scaffold_444_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13826..14878
DNA (1053bp) protein (351aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:00002
uxuA; mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=7 Tax=Clostridium perfringens RepID=H7CRU9_CLOPF rbh
NECEvent2014_8_5_scaffold_444_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14898..16298
DNA (1401bp) protein (467aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HA
uxaC; glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS46_CLOPF rbh
NECEvent2014_8_5_scaffold_444_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16416..17807
DNA (1392bp) protein (464aa)
Glucuronide permease n=3 Tax=Clostridium perfringens RepID=B1BKJ4_CLOPF rbh
Glucuronide permease {ECO:0000313|EMBL:EDT27278.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969
uidB; glucuronide permease
NECEvent2014_8_5_scaffold_444_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17867..19636
DNA (1770bp) protein (590aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
Beta-N-acetylglucosaminidase/beta-glucosidase (3-beta-N-acetyl-D-glucosaminidase/beta-D-glucosidase)(Nag3) n=5 Tax=Clostridium perfringens RepID=B1BKJ5_CLOPF rbh
beta-hexosamidase A
Displaying 19 items

View Taxonomy