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NECEvent2014_8_5_scaffold_446

Alias: 178_005_scaffold_446

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_446_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(129..632)
DNA (504bp) protein (168aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CTQ6_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18058.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_5_scaffold_446_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

953..1498
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TSY4_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24859.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_8_5_scaffold_446_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1538..2158)
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RN27_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT71640.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
hypothetical protein
NECEvent2014_8_5_scaffold_446_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2422..3366
DNA (945bp) protein (315aa)
Iron compound ABC transporter, iron compound-binding protein n=4 Tax=Clostridium perfringens RepID=H7CTQ9_CLOPF rbh
iron ABC transporter substrate-binding protein
Iron compound ABC transporter, iron compound-binding protein {ECO:0000313|EMBL:EIA18061.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_8_5_scaffold_446_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3465..4478
DNA (1014bp) protein (338aa)
Putative ferrichrome ABC transporter, permease protein FhuB n=2 Tax=Clostridium perfringens RepID=Q0TSY1_CLOP1 rbh
ferrichrome ABC transporter permease FhuB
Putative ferrichrome ABC transporter, permease protein FhuB {ECO:0000313|EMBL:EDT24813.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_8_5_scaffold_446_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4482..5495
DNA (1014bp) protein (338aa)
Putative ferrichrome ABC transporter, permease protein FhuG n=3 Tax=Clostridium perfringens RepID=Q0TSY0_CLOP1 rbh
ferrichrome ABC transporter permease FhuG
Putative ferrichrome ABC transporter, permease protein FhuG {ECO:0000313|EMBL:EDT28153.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_8_5_scaffold_446_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5658..6440
DNA (783bp) protein (261aa)
Putative ferrichrome ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3J3_CLOPF rbh
Putative ferrichrome ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT71613.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
fhuC; ferrichrome ABC transporter
NECEvent2014_8_5_scaffold_446_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6758..7246
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XM76_CLOPE rbh
GNAT family acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:BAB80520.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_446_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7323..7538
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XM75_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT28077.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_8_5_scaffold_446_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7531..7848
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R4M6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT24773.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_8_5_scaffold_446_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8062..8388)
DNA (327bp) protein (109aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CTR6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13299.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_5_scaffold_446_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8791..12174
DNA (3384bp) protein (1128aa)
Glycosyl hydrolase, family 85 n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RN18_CLOPF rbh
Glycosyl hydrolase, family 85 {ECO:0000313|EMBL:EDT28284.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE s
glycosyl hydrolase
NECEvent2014_8_5_scaffold_446_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12375..13283
DNA (909bp) protein (303aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Clostridium perfringens F262 RepID=H7CTR8_CLOPF rbh
NECEvent2014_8_5_scaffold_446_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13430..14257
DNA (828bp) protein (276aa)
HAD hydrolase, IIB family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCE9_CLOPF rbh
HAD family hydrolase
HAD hydrolase, IIB family {ECO:0000313|EMBL:EDT28366.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
NECEvent2014_8_5_scaffold_446_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14583..15563
DNA (981bp) protein (327aa)
PTS system mannose/fructose/sorbose family transporter subunit IIB (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:EDT71605.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDT71605.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridia
PTS system mannose/fructose/sorbose family IIB subunit n=4 Tax=Clostridium perfringens RepID=H7CTS0_CLOPF rbh
NECEvent2014_8_5_scaffold_446_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15614..16417
DNA (804bp) protein (268aa)
PTS system mannose-specific transporter subunit IIC n=7 Tax=Clostridium perfringens RepID=H7CTS1_CLOPF rbh
PTS system mannose/fructose/sorbose family transporter subunit IIC
PTS system {ECO:0000313|EMBL:BAB80528.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
NECEvent2014_8_5_scaffold_446_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16437..17348
DNA (912bp) protein (304aa)
PTS system, mannose/fructose/sorbose family, IID component n=6 Tax=Clostridium perfringens RepID=B1BFN1_CLOPF rbh
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:EDT28368.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
PTS system mannose/fructose/sorbose family transporter subunit IID
NECEvent2014_8_5_scaffold_446_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17519..17893
DNA (375bp) protein (125aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CTS3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT71603.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
NECEvent2014_8_5_scaffold_446_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18244..18591
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TSW7_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT71625.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
NECEvent2014_8_5_scaffold_446_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18817..19734
DNA (918bp) protein (306aa)
Polysaccharide deacetylase family protein n=4 Tax=Clostridium perfringens RepID=H7CTS5_CLOPF rbh
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EIA18077.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
polysaccharide deacetylase
Displaying 20 items

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