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NECEvent2014_8_5_scaffold_463

Alias: 178_005_scaffold_463

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_463_trna_1
unknown

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146..217
DNA (72bp)
transferRNA
NECEvent2014_8_5_scaffold_463_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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543..1226
DNA (684bp) protein (228aa)
DNA-binding response regulator n=9 Tax=Clostridium perfringens RepID=H7CYR4_CLOPF rbh
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:EDT27035.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE
NECEvent2014_8_5_scaffold_463_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1407..2822
DNA (1416bp) protein (472aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Sensor histidine kinase n=8 Tax=Clostridium perfringens RepID=H7CYR3_CLOPF rbh
sensor histidine kinase
NECEvent2014_8_5_scaffold_463_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2839..4362
DNA (1524bp) protein (508aa)
Putative lipoprotein n=4 Tax=Clostridium perfringens RepID=B1BRP0_CLOPF rbh
Putative lipoprotein {ECO:0000313|EMBL:EDT15579.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987
lipoprotein
NECEvent2014_8_5_scaffold_463_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4501..6390)
DNA (1890bp) protein (630aa)
sulfatase (EC:3.1.6.-)
Sulfatase n=3 Tax=Clostridium perfringens RepID=H7CYR1_CLOPF rbh
Sulfatase {ECO:0000313|EMBL:EIA16243.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_5_scaffold_463_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6572..7144
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RG99_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27034.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_8_5_scaffold_463_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7176..8138
DNA (963bp) protein (321aa)
Probable monooxygenase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XI86_CLOPE rbh
oxidoreductase, pyridine nucleotide-disulfide family
Probable monooxygenase {ECO:0000313|EMBL:BAB81941.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 /
NECEvent2014_8_5_scaffold_463_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8275..8835)
DNA (561bp) protein (187aa)
Putative acyl-CoA thioesterase n=3 Tax=Clostridium perfringens RepID=B1BK64_CLOPF rbh
Putative acyl-CoA thioesterase {ECO:0000313|EMBL:EDT27027.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE
acyl-CoA thioesterase
NECEvent2014_8_5_scaffold_463_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8844..9476)
DNA (633bp) protein (211aa)
Endodeoxyribonuclease, RusA family protein n=2 Tax=Clostridium perfringens RepID=Q0TN79_CLOP1 rbh
endodeoxyribonuclease RusA
Uncharacterized protein {ECO:0000313|EMBL:BAB81939.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_463_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9618..10637
DNA (1020bp) protein (340aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
tRNA N6-adenosine threonylcarbamoyltransferase n=10 Tax=Clostridium perfringens RepID=TSAD_CLOP1 rbh
gcp; DNA-binding/iron metalloprotein/AP endonuclease
NECEvent2014_8_5_scaffold_463_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10688..11671
DNA (984bp) protein (328aa)
Hydrolase, alpha/beta fold family protein n=5 Tax=Clostridium perfringens RepID=H7CYQ5_CLOPF rbh
alpha/beta fold family hydrolase
Uncharacterized protein {ECO:0000313|EMBL:BAB81937.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_463_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11788..13167
DNA (1380bp) protein (460aa)
Serine protease {ECO:0000313|EMBL:EDT70964.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDT70964.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
Serine protease n=5 Tax=Clostridium perfringens RepID=H7CYQ4_CLOPF rbh
serine protease
NECEvent2014_8_5_scaffold_463_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13412..13741
DNA (330bp) protein (110aa)
Probable PTS system n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XI92_CLOPE
PTS system protein
Probable PTS system {ECO:0000313|EMBL:BAB81935.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Ty
NECEvent2014_8_5_scaffold_463_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13902..15026
DNA (1125bp) protein (375aa)
Putative ethanolamine utilization protein EutH n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R757_CLOPF rbh
ethanolamine utilization protein EutH
Ethanolamine utilization protein EutH {ECO:0000313|EMBL:EIA16234.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_8_5_scaffold_463_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15150..16178)
DNA (1029bp) protein (343aa)
Thiamin biosynthesis lipoprotein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XI94_CLOPE rbh
apbA; thiamin biosynthesis lipoprotein
Thiamin biosynthesis lipoprotein {ECO:0000313|EMBL:BAB81933.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (s
NECEvent2014_8_5_scaffold_463_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16213..16656)
DNA (444bp) protein (148aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XI95_CLOPE
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EIA16232.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_5_scaffold_463_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16797..17168
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGB0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26975.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_8_5_scaffold_463_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17361..17891
DNA (531bp) protein (177aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q8XI97_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70963.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
NECEvent2014_8_5_scaffold_463_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18124..19269)
DNA (1146bp) protein (382aa)
Probable mannosyltransferase B n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XI98_CLOPE rbh
mannosyltransferase
Probable mannosyltransferase B {ECO:0000313|EMBL:BAB81929.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
Displaying 19 items

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