ggKbase home page

NECEvent2014_8_5_scaffold_487

Alias: 178_005_scaffold_487

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_487_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75..839)
DNA (765bp) protein (255aa)
UPF0246 protein CPE2152 n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Y2152_CLOPE rbh
hypothetical protein
UPF0246 protein CPE2152 {ECO:0000255|HAMAP-Rule:MF_00652}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain
NECEvent2014_8_5_scaffold_487_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1006..1416)
DNA (411bp) protein (137aa)
CBS domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CYH7_CLOPF
CBS domain-containing protein
CBS domain-containing protein {ECO:0000313|EMBL:EIA16355.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_8_5_scaffold_487_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1502..2404)
DNA (903bp) protein (301aa)
Exonuclease family protein n=10 Tax=Clostridium perfringens RepID=H7CYH8_CLOPF rbh
exonuclease
Exonuclease family protein {ECO:0000313|EMBL:EDT15540.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. J
NECEvent2014_8_5_scaffold_487_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2659..4470)
DNA (1812bp) protein (604aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNF7_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81861.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_487_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4586..6373)
DNA (1788bp) protein (596aa)
MutS-related protein n=2 Tax=Clostridium perfringens RepID=Q8XIG4_CLOPE rbh
MutS domain protein {ECO:0000313|EMBL:EDT27774.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.
MutS domain-containing protein
NECEvent2014_8_5_scaffold_487_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6677..8206)
DNA (1530bp) protein (510aa)
PTS system, glucose-specific IIBC component {ECO:0000313|EMBL:EDT27685.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDT27685.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
PTS system, glucose-specific IIBC component n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDY3_CLOPF rbh
PTS system glucose-specific transporter subunit IIBC
NECEvent2014_8_5_scaffold_487_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8377..9273)
DNA (897bp) protein (299aa)
ABC transporter, substrate-binding protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDY2_CLOPF rbh
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EDT27811.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
ABC transporter substrate-binding protein
NECEvent2014_8_5_scaffold_487_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9499..12267)
DNA (2769bp) protein (923aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDY1_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT27718.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_8_5_scaffold_487_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12257..13396)
DNA (1140bp) protein (380aa)
Ser/Thr protein phosphatase family protein n=2 Tax=Clostridium perfringens RepID=B1BKD5_CLOPF rbh
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDS79724.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
Ser/Thr protein phosphatase
NECEvent2014_8_5_scaffold_487_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13677..13859)
DNA (183bp) protein (61aa)
Small, acid-soluble spore protein 1 n=11 Tax=Clostridium perfringens RepID=SAS0_CLOPE
small acid-soluble protein Ssp1
Small, acid-soluble spore protein 1 {ECO:0000313|EMBL:EIA16363.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_5_scaffold_487_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13999..16176)
DNA (2178bp) protein (726aa)
2`,3`-cyclic-nucleotide 2`-phosphodiesterase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIF9_CLOPE rbh
cpdC; 2`,3`-cyclic-nucleotide 2`-phosphodiesterase
2`,3`-cyclic-nucleotide 2`-phosphodiesterase {ECO:0000313|EMBL:BAB81868.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
NECEvent2014_8_5_scaffold_487_trna_2
unknown

Not on your lists

comp(16337..16409)
DNA (73bp)
transferRNA
NECEvent2014_8_5_scaffold_487_trna_1
unknown

Not on your lists

comp(16441..16513)
DNA (73bp)
transferRNA
NECEvent2014_8_5_scaffold_487_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16776..17396)
DNA (621bp) protein (207aa)
CBS domain protein n=2 Tax=Clostridium perfringens RepID=B1RGH1_CLOPF rbh
CBS domain protein {ECO:0000313|EMBL:EDT27004.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;
hypothetical protein
NECEvent2014_8_5_scaffold_487_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17912..18625
DNA (714bp) protein (238aa)
Transposase, IS605 OrfB family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGH0_CLOPF
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EDT26958.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE
IS605 family transposase OrfB
Displaying 15 items

View Taxonomy