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NECEvent2014_8_5_scaffold_545

Alias: 178_005_scaffold_545

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_545_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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225..1400
DNA (1176bp) protein (392aa)
Triple helix repeat-containing collagen n=2 Tax=Clostridium perfringens RepID=H7CUU3_CLOPF rbh
Triple helix repeat-containing collagen {ECO:0000313|EMBL:EIA17527.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
triple helix repeat-containing collagen
NECEvent2014_8_5_scaffold_545_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1517..2053)
DNA (537bp) protein (179aa)
Glutathione peroxidase n=8 Tax=Clostridium perfringens RepID=H7CUT9_CLOPF rbh
glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_5_scaffold_545_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2270..3481)
DNA (1212bp) protein (404aa)
Pyridine nucleotide-disulphide oxidoreductase family protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SU59_CLOPS rbh
pyridine nucleotide-disulphide oxidoreductase family protein
Pyridine nucleotide-disulphide oxidoreductase family protein {ECO:0000313|EMBL:ABG85440.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_8_5_scaffold_545_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3782..4009
DNA (228bp) protein (76aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CUT5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17519.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_5_scaffold_545_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4113..5021)
DNA (909bp) protein (303aa)
hpkA; sensor histidine kinase (EC:2.7.3.-)
Sensor histidine kinase n=1 Tax=Clostridium perfringens F262 RepID=H7CUT4_CLOPF rbh
Sensor histidine kinase {ECO:0000313|EMBL:EIA17518.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_5_scaffold_545_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5032..5784)
DNA (753bp) protein (251aa)
Putative bacitracin ABC transporter, permease protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BVB5_CLOPF rbh
Putative bacitracin ABC transporter, permease protein {ECO:0000313|EMBL:EDT14360.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
hypothetical protein
NECEvent2014_8_5_scaffold_545_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5777..6697)
DNA (921bp) protein (307aa)
Probable ABC transporter n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XLU1_CLOPE rbh
ABC transporter
Probable ABC transporter {ECO:0000313|EMBL:BAB80655.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_545_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6907..7596)
DNA (690bp) protein (230aa)
DNA-binding response regulator n=6 Tax=Clostridium perfringens RepID=H7CUT1_CLOPF rbh
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:EDT14361.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
NECEvent2014_8_5_scaffold_545_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7940..9247)
DNA (1308bp) protein (436aa)
Sodium:dicarboxylate symporter family protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SU65_CLOPS rbh
sodium:dicarboxylate symporter family protein
Sodium:dicarboxylate symporter family protein {ECO:0000313|EMBL:ABG85685.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
NECEvent2014_8_5_scaffold_545_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10001..10882
DNA (882bp) protein (294aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q8XLU4_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80652.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_545_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11137..11793
DNA (657bp) protein (219aa)
Pentapeptide repeat protein n=3 Tax=Clostridium perfringens RepID=Q0TRV5_CLOP1 rbh
pentapeptide repeat-containing protein
Pentapeptide repeat protein {ECO:0000313|EMBL:EDT14365.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str.
NECEvent2014_8_5_scaffold_545_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11850..12839)
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQ02_CLOPF rbh
Putative lysophospholipase {ECO:0000313|EMBL:EDS80756.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. J
lysophospholipase
NECEvent2014_8_5_scaffold_545_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13022..13366
DNA (345bp) protein (115aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CUS6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17510.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_5_scaffold_545_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13380..13757
DNA (378bp) protein (126aa)
Putative membrane protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BVC3_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT14392.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
hypothetical protein
NECEvent2014_8_5_scaffold_545_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13868..14686
DNA (819bp) protein (273aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CUS4_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA17508.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_8_5_scaffold_545_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14792..15562
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BVC5_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT26731.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_8_5_scaffold_545_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15630..16142)
DNA (513bp) protein (171aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RH49_CLOPF rbh
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDT26740.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE
GNAT family acetyltransferase
NECEvent2014_8_5_scaffold_545_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16484..17158)
DNA (675bp) protein (225aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CUS1_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17505.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 18 items

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