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NECEvent2014_8_5_scaffold_601

Alias: 178_005_scaffold_601

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_601_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..663
DNA (663bp) protein (221aa)
Putative membrane protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGU1_CLOPF rbh
Putative membrane protein {ECO:0000313|EMBL:EDT26849.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
hypothetical protein
NECEvent2014_8_5_scaffold_601_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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853..1158
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CTC7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17929.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_5_scaffold_601_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1405..2055
DNA (651bp) protein (217aa)
dut; deoxyuridine 5-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5-triphosphate nucleotidohydrolase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQR2_CLOPF rbh
Deoxyuridine 5-triphosphate nucleotidohydrolase {ECO:0000313|EMBL:EIA17930.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_8_5_scaffold_601_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2558..3868
DNA (1311bp) protein (437aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiam
Phosphomethylpyrimidine synthase n=3 Tax=Clostridium perfringens RepID=THIC_CLOP1 rbh
thiC; thiamine biosynthesis protein ThiC
NECEvent2014_8_5_scaffold_601_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4105..7905
DNA (3801bp) protein (1267aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EDT16403.1}; EC=6.3.5.3 {ECO:0000313|EMBL:EDT16403.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
Phosphoribosylformylglycinamidine synthase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQR0_CLOPF rbh
purL; phosphoribosylformylglycinamidine synthase
NECEvent2014_8_5_scaffold_601_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8227..8706
DNA (480bp) protein (160aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=8 Tax=Clostridium perfringens RepID=Q0SV53_CLOPS rbh
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
NECEvent2014_8_5_scaffold_601_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8706..9413
DNA (708bp) protein (236aa)
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000255|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000255|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000255|HAMAP-Rule:MF_00137}; TaxID=19
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=4 Tax=Clostridium perfringens RepID=PUR7_CLOP1 rbh
NECEvent2014_8_5_scaffold_601_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9663..11108
DNA (1446bp) protein (482aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=2 Tax=Clostridium perfringens RepID=Q8XMK5_CLOPE rbh
NECEvent2014_8_5_scaffold_601_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11109..12110
DNA (1002bp) protein (334aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BL54_CLOPF rbh
NECEvent2014_8_5_scaffold_601_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12098..12712
DNA (615bp) protein (205aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=3 Tax=Clostridium perfringens RepID=H7CTD5_CLOPF rbh
NECEvent2014_8_5_scaffold_601_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12725..14230
DNA (1506bp) protein (502aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6K4_CLOPF rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
NECEvent2014_8_5_scaffold_601_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14347..15597
DNA (1251bp) protein (417aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPD7_CLOPF rbh
NECEvent2014_8_5_scaffold_601_trna_1
unknown

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comp(16027..16112)
DNA (86bp)
transferRNA
Displaying 13 items

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