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NECEvent2014_8_5_scaffold_613

Alias: 178_005_scaffold_613

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_613_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(136..543)
DNA (408bp) protein (136aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CY79_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15281.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_5_scaffold_613_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

800..1474
DNA (675bp) protein (225aa)
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256
Deoxyribose-phosphate aldolase n=3 Tax=Clostridium perfringens RepID=DEOC_CLOP1 rbh
NECEvent2014_8_5_scaffold_613_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1675..3960
DNA (2286bp) protein (762aa)
ATP-dependent protease n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIG6_CLOPF rbh
ATP-dependent protease {ECO:0000313|EMBL:EDS80446.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS14
ATP-dependent protease
NECEvent2014_8_5_scaffold_613_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4094..4429
DNA (336bp) protein (112aa)
Anti-sigma F factor antagonist n=11 Tax=Clostridium perfringens RepID=H7CY76_CLOPF
spoIIAA; anti-sigma F factor antagonist
Anti-sigma F factor antagonist {ECO:0000256|RuleBase:RU003749}; Stage II sporulation protein {ECO:0000256|RuleBase:RU003749}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
NECEvent2014_8_5_scaffold_613_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4443..4865
DNA (423bp) protein (141aa)
spoIIAB; anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor {ECO:0000256|HAMAP-Rule:MF_00637}; EC=2.7.11.1 {ECO:0000256|HAMAP-Rule:MF_00637};; Stage II sporulation protein AB {ECO:0000256|HAMAP-Rule:MF_00637}; TaxID=883064 species="Bacteria
Anti-sigma F factor n=10 Tax=Clostridium perfringens RepID=SP2AB_CLOP1
NECEvent2014_8_5_scaffold_613_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4883..5644
DNA (762bp) protein (254aa)
RNA polymerase sigma factor n=10 Tax=Clostridium perfringens RepID=H7CY74_CLOPF rbh
sigF; sporulation sigma factor SigF
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE s
NECEvent2014_8_5_scaffold_613_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5775..6245
DNA (471bp) protein (157aa)
Stage V sporulation protein AC n=4 Tax=Clostridium perfringens RepID=Q0SRC9_CLOPS rbh
spoVAC; stage V sporulation protein AC
Stage V sporulation protein AC {ECO:0000313|EMBL:EDT15270.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
NECEvent2014_8_5_scaffold_613_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6248..7267
DNA (1020bp) protein (340aa)
Stage V sporulation protein AD n=6 Tax=Clostridium perfringens RepID=Q8XIR8_CLOPE rbh
spoVAD; stage V sporulation protein AD
Stage V sporulation protein AD {ECO:0000313|EMBL:EDT73154.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D st
NECEvent2014_8_5_scaffold_613_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7319..7675
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIH1_CLOPF
spoVAE; stage V sporulation protein AE
Stage V sporulation protein AE {ECO:0000313|EMBL:ABG85519.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
NECEvent2014_8_5_scaffold_613_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7727..9382
DNA (1656bp) protein (552aa)
Competence family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNR6_CLOP1 rbh
competence family protein
Competence family protein {ECO:0000313|EMBL:EDS80366.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JG
NECEvent2014_8_5_scaffold_613_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9426..10472
DNA (1047bp) protein (349aa)
holA; DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III subunit delta n=2 Tax=Clostridium perfringens RepID=H7CY69_CLOPF rbh
DNA polymerase III subunit delta {ECO:0000313|EMBL:EIA16247.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F2
NECEvent2014_8_5_scaffold_613_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10568..10831)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=8 Tax=Clostridium perfringens RepID=RS20_CLOP1
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_8_5_scaffold_613_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11027..12004
DNA (978bp) protein (326aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-
gpr; germination protease (EC:3.4.24.78)
Germination protease n=2 Tax=Clostridium perfringens RepID=H7CY67_CLOPF rbh
NECEvent2014_8_5_scaffold_613_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12153..13238
DNA (1086bp) protein (362aa)
Stage II sporulation protein P n=3 Tax=Clostridium perfringens RepID=Q0TNS0_CLOP1 rbh
stage II sporulation protein P
Stage II sporulation protein P {ECO:0000313|EMBL:BAB81746.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
NECEvent2014_8_5_scaffold_613_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13305..13655
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNS1_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25257.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_8_5_scaffold_613_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13776..15578
DNA (1803bp) protein (601aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=4 Tax=Clostridium perfringens RepID=LEPA_CLOPE rbh
lepA; GTP-binding protein LepA
Displaying 16 items

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