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NECEvent2014_8_5_scaffold_646

Alias: 178_005_scaffold_646

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_646_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13..1233)
DNA (1221bp) protein (407aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:M
pepT; peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHA4_CLOPF rbh
NECEvent2014_8_5_scaffold_646_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1425..2585
DNA (1161bp) protein (387aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHA5_CLOPF rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDT26699.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
ErfK/YbiS/YcfS/YnhG family protein
NECEvent2014_8_5_scaffold_646_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2617..3609)
DNA (993bp) protein (331aa)
3'-5' exoribonuclease YhaM n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHA6_CLOPF rbh
3'-5' exoribonuclease YhaM {ECO:0000313|EMBL:EDT26647.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
CMP-binding factor
NECEvent2014_8_5_scaffold_646_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3725..4993
DNA (1269bp) protein (423aa)
PolyA polymerase family protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWW3_CLOPS rbh
polyA polymerase family protein
PolyA polymerase family protein {ECO:0000313|EMBL:ABG86854.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (st
NECEvent2014_8_5_scaffold_646_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5032..8847)
DNA (3816bp) protein (1272aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {E
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHY5_CLOPF rbh
addA; ATP-dependent nuclease subunit A
NECEvent2014_8_5_scaffold_646_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8837..12313)
DNA (3477bp) protein (1159aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044573}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044602};; EC=3.
ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CWR2_CLOPF rbh
addB; ATP-dependent nuclease subunit B
NECEvent2014_8_5_scaffold_646_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12522..12686
DNA (165bp) protein (55aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CRG7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26666.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_8_5_scaffold_646_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12775..13656)
DNA (882bp) protein (294aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CRG6_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79724.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_646_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13905..14087
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BTI0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15044.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_8_5_scaffold_646_trna_4
unknown

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comp(14125..14212)
DNA (88bp)
transferRNA
NECEvent2014_8_5_scaffold_646_trna_3
unknown

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comp(14221..14308)
DNA (88bp)
transferRNA
NECEvent2014_8_5_scaffold_646_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14417..14725)
DNA (309bp) protein (103aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CRG4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18695.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_5_scaffold_646_trna_2
unknown

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comp(14945..15032)
DNA (88bp)
transferRNA
NECEvent2014_8_5_scaffold_646_trna_1
unknown

Not on your lists

comp(15069..15156)
DNA (88bp)
transferRNA
Displaying 14 items

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