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NECEvent2014_8_5_scaffold_826

Alias: 178_005_scaffold_826

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_826_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(91..570)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rR
Ribosomal RNA large subunit methyltransferase H 1 n=8 Tax=Clostridium perfringens RepID=RLMH1_CLOPS rbh
rRNA large subunit methyltransferase
NECEvent2014_8_5_scaffold_826_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(822..1193)
DNA (372bp) protein (124aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BET1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81681.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_8_5_scaffold_826_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1423..2064)
DNA (642bp) protein (214aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CZW1_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24315.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_8_5_scaffold_826_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2171..2671)
DNA (501bp) protein (167aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CZW2_CLOPF rbh
hypothetical protein
SEC-C domain protein {ECO:0000313|EMBL:EDS81720.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495
NECEvent2014_8_5_scaffold_826_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2815..3369)
DNA (555bp) protein (185aa)
Putative lipoprotein n=8 Tax=Clostridium perfringens RepID=H7CZW3_CLOPF rbh
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EDT13674.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987
NECEvent2014_8_5_scaffold_826_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3385..4176)
DNA (792bp) protein (264aa)
Metallo-beta-lactamase family protein n=5 Tax=Clostridium perfringens RepID=H7CZW4_CLOPF rbh
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EDS81712.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
metallo-beta-lactamase
NECEvent2014_8_5_scaffold_826_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4199..5452)
DNA (1254bp) protein (418aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 n=9 Tax=Clostridium perfringens RepID=MURA2_CLOPE rbh
NECEvent2014_8_5_scaffold_826_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5792..6337
DNA (546bp) protein (182aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XH78_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82313.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_826_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6532..7011
DNA (480bp) protein (160aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=Q0SPU2_CLOPS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25804.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_8_5_scaffold_826_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7067..7498
DNA (432bp) protein (144aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XH76_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82315.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_826_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7565..8761
DNA (1197bp) protein (399aa)
Subtilase family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BEU0_CLOPF rbh
Subtilase family protein {ECO:0000313|EMBL:EDS81683.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS
subtilase
NECEvent2014_8_5_scaffold_826_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8764..9816)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XH74_CLOPE rbh
M23/M37 family peptidase
Uncharacterized protein {ECO:0000313|EMBL:BAB82317.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_826_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10058..11047
DNA (990bp) protein (330aa)
DnaD and phage-associated domain-containing protein n=10 Tax=Clostridium perfringens RepID=H1CVU2_CLOPF rbh
DNA replication protein DnaD
Putative DNA replication protein DnaD {ECO:0000313|EMBL:EDT25797.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_8_5_scaffold_826_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11044..12039
DNA (996bp) protein (332aa)
Putative DNA replication protein DnaC n=4 Tax=Clostridium perfringens RepID=Q0TM36_CLOP1 rbh
DNA replication protein DnaC
Putative DNA replication protein DnaC {ECO:0000313|EMBL:EDT24231.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_8_5_scaffold_826_trna_3
unknown

Not on your lists

comp(12134..12206)
DNA (73bp)
transferRNA
NECEvent2014_8_5_scaffold_826_trna_2
unknown

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comp(12213..12286)
DNA (74bp)
transferRNA
NECEvent2014_8_5_scaffold_826_trna_1
unknown

Not on your lists

comp(12301..12373)
DNA (73bp)
transferRNA
Displaying 17 items

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