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NECEvent2014_8_5_scaffold_303

Alias: 178_005_scaffold_303

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_303_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1049
DNA (1047bp) protein (349aa)
Putative cytochrome c-type biogenesis protein CcmF n=1 Tax=Escherichia coli B41 RepID=I2ZJL6_ECOLX rbh
nfrE; heme lyase subunit NrfE
Cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:KEN85201.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_8_5_scaffold_303_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1042..1425
DNA (384bp) protein (128aa)
Formate-dependent nitrite reductase complex subunit NrfF n=93 Tax=Escherichia RepID=NRFF_ECOLI
nfrF; formate-dependent nitrite reductase complex subunit NrfF
Cytochrome C biogenesis family protein {ECO:0000313|EMBL:KDZ19289.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_8_5_scaffold_303_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1422..2018
DNA (597bp) protein (199aa)
Formate-dependent nitrite reductase complex subunit NrfG n=84 Tax=Escherichia RepID=NRFG_ECOLI rbh
nfrG; formate-dependent nitrite reductase complex subunit NrfG rbh
TPR repeat family protein {ECO:0000313|EMBL:ENB24126.1}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_5_scaffold_303_4
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2360..3673
DNA (1314bp) protein (438aa)
Glutamate-aspartate symport protein n=836 Tax=Enterobacteriaceae RepID=C3SH62_ECOLX rbh
gltP; glutamate/aspartate:proton symporter
Proton glutamate symport protein {ECO:0000313|EMBL:EIQ30033.1}; TaxID=766140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella
NECEvent2014_8_5_scaffold_303_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3752..4441)
DNA (690bp) protein (230aa)
Sel1 repeat protein (Fragment) n=2 Tax=Escherichia coli RepID=D7ZZP6_ECOLX rbh
hypothetical protein
Sel1 repeat protein {ECO:0000313|EMBL:EFJ85386.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M
NECEvent2014_8_5_scaffold_303_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4535..6214)
DNA (1680bp) protein (560aa)
Formate dehydrogenase H n=1853 Tax=Enterobacteriaceae RepID=FDHF_ECOLI rbh
formate dehydrogenase H alph subunit (formate-hydrogen-lyase-linked selenocysteine-containing polypeptide) rbh
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EGI43010.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_8_5_scaffold_303_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6263..6682)
DNA (420bp) protein (140aa)
Formate dehydrogenase-H, selenopolypeptide subunit n=335 Tax=Escherichia RepID=E2QJX1_ECOLX
formate dehydrogenase subunit alpha
Formate dehydrogenase H {ECO:0000313|EMBL:EOV73805.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_5_scaffold_303_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6880..8346)
DNA (1467bp) protein (489aa)
Multidrug resistance outer membrane protein MdtP n=128 Tax=Enterobacteriaceae RepID=MDTP_ECOLI rbh
mdtP; putative outer membrane efflux protein MdtP
Multidrug resistance outer membrane protein MdtP {ECO:0000313|EMBL:ESE00345.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_8_5_scaffold_303_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8343..10394)
DNA (2052bp) protein (684aa)
Multidrug resistance protein MdtO n=74 Tax=Escherichia RepID=MDTO_ECOLI rbh
multidrug resistance protein rbh
Fusaric acid resistance family protein {ECO:0000313|EMBL:KDY59190.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_8_5_scaffold_303_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10394..11425)
DNA (1032bp) protein (344aa)
Multidrug resistance protein MdtN n=272 Tax=Escherichia RepID=MDTN_ECOLI rbh
yjcR; Inner membrane component of tripartite multidrug resistance system
Efflux pump membrane family protein {ECO:0000313|EMBL:EHV51254.1}; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_8_5_scaffold_303_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11444..11719)
DNA (276bp) protein (92aa)
Uncharacterized protein YtcA n=208 Tax=Enterobacteriaceae RepID=YTCA_ECOLI
formate dehydrogenase H
Putative membrane protein {ECO:0000313|EMBL:EMX81271.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_5_scaffold_303_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11928..13913)
DNA (1986bp) protein (662aa)
Putative alkyl/aryl-sulfatase YjcS n=76 Tax=Escherichia RepID=YJCS_ECOLI rbh
putative alkyl sulfatase rbh
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:KDY89607.1}; TaxID=1444127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_8_5_scaffold_303_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14186..15115)
DNA (930bp) protein (310aa)
D-allose kinase {ECO:0000256|HAMAP-Rule:MF_00988}; Short=Allokinase {ECO:0000256|HAMAP-Rule:MF_00988};; EC=2.7.1.55 {ECO:0000256|HAMAP-Rule:MF_00988};; TaxID=1444279 species="Bacteria; Proteobacteria;
D-allose kinase n=117 Tax=Escherichia RepID=ALSK_ECOLI rbh
ROK family protein
NECEvent2014_8_5_scaffold_303_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15099..15794)
DNA (696bp) protein (232aa)
allulose-6-phosphate 3-epimerase (EC:5.1.3.1) rbh
D-allulose-6-phosphate 3-epimerase {ECO:0000313|EMBL:EMU65325.1}; EC=5.1.3.- {ECO:0000313|EMBL:EMU65325.1};; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
D-allulose-6-phosphate 3-epimerase n=209 Tax=Escherichia RepID=ALSE_ECOLI rbh
NECEvent2014_8_5_scaffold_303_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15805..16785)
DNA (981bp) protein (327aa)
D-allose transport system permease protein AlsC {ECO:0000313|EMBL:EII47850.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EII47850.1};; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enteroba
D-allose transport system permease protein AlsC n=246 Tax=Escherichia RepID=ALSC_ECOLI rbh
alsC; D-allose transporter subunit
NECEvent2014_8_5_scaffold_303_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16764..18296)
DNA (1533bp) protein (511aa)
Heme ABC exporter, ATP-binding protein CcmA {ECO:0000313|EMBL:KDU31893.1}; EC=3.6.3.41 {ECO:0000313|EMBL:KDU31893.1};; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacte
D-allose import ATP-binding protein AlsA n=161 Tax=Bacteria RepID=ALSA_ECOLI rbh
ABC transporter
NECEvent2014_8_5_scaffold_303_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18423..19358)
DNA (936bp) protein (312aa)
D-allose-binding periplasmic protein n=145 Tax=Escherichia RepID=ALSB_ECOLI rbh
D-allose transporter subunit
D-allose-binding periplasmic protein {ECO:0000313|EMBL:KDU31892.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_8_5_scaffold_303_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19417..20307)
DNA (891bp) protein (297aa)
HTH-type transcriptional regulator RpiR n=644 Tax=Escherichia RepID=RPIR_ECOL6 rbh
rpiR; transcriptional repressor of ribose catabolism RpiR/YebK family
HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:EQP43875.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
NECEvent2014_8_5_scaffold_303_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20666..21115
DNA (450bp) protein (150aa)
ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:EMV51281.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EMV51281.1};; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
Ribose-5-phosphate isomerase B n=241 Tax=Escherichia RepID=RPIB_ECOLI rbh
NECEvent2014_8_5_scaffold_303_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21184..21513
DNA (330bp) protein (110aa)
Uncharacterized protein YjdP n=697 Tax=Enterobacteriaceae RepID=YJDP_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHW09139.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_5_scaffold_303_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21660..22418)
DNA (759bp) protein (253aa)
Carbon-phosphorus lyase complex accessory protein n=1 Tax=Escherichia coli (strain B / REL606) RepID=C6UK90_ECOBR rbh
phnP; carbon-phosphorus lyase complex accessoryprotein
Phosphonate metabolism protein PhnP {ECO:0000313|EMBL:EMX33504.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_8_5_scaffold_303_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22420..22854)
DNA (435bp) protein (145aa)
Protein PhnO n=479 Tax=Enterobacteriaceae RepID=PHNO_ECOLI rbh
phnO; aminoalkylphosphonic acid N-acetyltransferase
Acetyltransferase family protein {ECO:0000313|EMBL:KDU31886.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_8_5_scaffold_303_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22841..23398)
DNA (558bp) protein (186aa)
Ribose 1,5-bisphosphate phosphokinase PhnN {ECO:0000256|HAMAP-Rule:MF_00836}; EC=2.7.4.23 {ECO:0000256|HAMAP-Rule:MF_00836};; Ribose 1,5-bisphosphokinase {ECO:0000256|HAMAP-Rule:MF_00836}; TaxID=11160
Ribose 1,5-bisphosphate phosphokinase PhnN n=175 Tax=Enterobacteriaceae RepID=PHNN_ECOLI rbh
phosphonate metabolism protein/1,5-bisphosphokinase PhnN
NECEvent2014_8_5_scaffold_303_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23398..23742)
DNA (345bp) protein (115aa)
Phosphonate metabolism protein PhnM n=10 Tax=Escherichia RepID=H4VPI4_ECOLX
phosphonate metabolism protein PhnM
Phosphonate metabolism protein PhnM {ECO:0000313|EMBL:KEN94056.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_8_5_scaffold_303_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23761..24534)
DNA (774bp) protein (258aa)
Phosphonate metabolism protein PhnM n=2 Tax=Escherichia coli RepID=L4K0X6_ECOLX
phnM; carbon-phosphorus lyase complex subunit
Phosphonate metabolism protein PhnM {ECO:0000313|EMBL:EFI90521.1}; TaxID=749548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_8_5_scaffold_303_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24531..24962)
DNA (432bp) protein (144aa)
Phosphonate C-P lyase system protein PhnL n=1 Tax=Escherichia coli 2733950 RepID=N3IR57_ECOLX
phnL; carbon-phosphorus lyase complex subunit
Phosphonate transport ATP-binding protein PhnL {ECO:0000313|EMBL:EQY09904.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_8_5_scaffold_303_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24993..25211)
DNA (219bp) protein (73aa)
Phosphonate transport ATP-binding protein PhnL n=1 Tax=Escherichia coli KTE14 RepID=S0V011_ECOLX
phosphonate C-P lyase system protein PhnL
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZE25133.1}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
NECEvent2014_8_5_scaffold_303_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25322..25546)
DNA (225bp) protein (75aa)
Phosphonate C-P lyase system protein PhnK n=1 Tax=Escherichia coli O157:H7 str. LSU-61 RepID=E8J9B8_ECO57
phnK; phosphonate C-P lyase system protein PhnK
Phosphonate transport ATP-binding protein PhnK {ECO:0000313|EMBL:ELE50923.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
Displaying 28 items

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