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NECEvent2014_8_5_scaffold_919

Alias: 178_005_scaffold_919

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_919_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1073
DNA (1071bp) protein (357aa)
Spermidine/putrescine transporter subunit n=1 Tax=Escherichia coli KOEGE 7 (16a) RepID=U0BEI2_ECOLX rbh
ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) {ECO:0000313|EMBL:CDL26549.1}; TaxID=1432555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacte
ydcT; putative spermidine/putrescine transporter subunit
NECEvent2014_8_5_scaffold_919_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1074..2015
DNA (942bp) protein (314aa)
Inner membrane ABC transporter permease protein YdcU n=104 Tax=Enterobacteriaceae RepID=YDCU_ECOLI rbh
ydcU; predicted spermidine/putrescine transporter subunit
Inner membrane ABC transporter permease protein ydcU {ECO:0000313|EMBL:KDZ35398.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
NECEvent2014_8_5_scaffold_919_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2005..2799
DNA (795bp) protein (265aa)
Inner membrane ABC transporter permease protein YdcV n=372 Tax=Enterobacteriaceae RepID=YDCV_ECOLI rbh
binding-protein-dependent transport system inner membrane protein
Inner membrane ABC transporter permease ydcV {ECO:0000313|EMBL:ELJ74004.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_8_5_scaffold_919_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2821..4245
DNA (1425bp) protein (475aa)
Gamma-aminobutyraldehyde dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01275}; EC=1.2.1.19 {ECO:0000255|HAMAP-Rule:MF_01275};; 1-pyrroline dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01275}; 4-aminobutanal de
Gamma-aminobutyraldehyde dehydrogenase n=10 Tax=Escherichia coli RepID=ABDH_ECOBW rbh
ydcW; medium chain aldehyde dehydrogenase
NECEvent2014_8_5_scaffold_919_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4632..4805
DNA (174bp) protein (58aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=V6EIK9_ECOLX
ydcX; putative inner membrane protein
Membrane protein {ECO:0000313|EMBL:EZE29364.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O12
NECEvent2014_8_5_scaffold_919_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4891..5124
DNA (234bp) protein (78aa)
Uncharacterized protein YdcY n=1340 Tax=cellular organisms RepID=YDCY_ECO57
hypothetical protein
PF10735 family protein {ECO:0000313|EMBL:EIG83921.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_8_5_scaffold_919_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5125..5574)
DNA (450bp) protein (150aa)
Inner membrane protein YdcZ n=513 Tax=Enterobacteriaceae RepID=YDCZ_ECOLI
hypothetical protein
Inner membrane protein ydcZ {ECO:0000313|EMBL:ELE01064.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_8_5_scaffold_919_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5571..6089)
DNA (519bp) protein (173aa)
N-acyltransferase YncA n=100 Tax=Escherichia RepID=YNCA_ECOLI rbh
yncA; putative acyltransferase with acyl-CoA N-acyltransferase domain rbh
Acetyltransferase family protein {ECO:0000313|EMBL:KEN99496.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_8_5_scaffold_919_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6270..7307
DNA (1038bp) protein (346aa)
Putative NADP-dependent oxidoreductase YncB n=1 Tax=Escherichia coli H736 RepID=F4SIN5_ECOLX rbh
putative oxidoreductase
Putative oxidoreductase YncB {ECO:0000313|EMBL:CDK83857.1}; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_8_5_scaffold_919_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7505..8170
DNA (666bp) protein (222aa)
HTH-type transcriptional regulator McbR n=141 Tax=Escherichia RepID=MCBR_ECOLI rbh
GntR family transcriptional regulator rbh
HTH-type transcriptional regulator mcbR {ECO:0000313|EMBL:KDU28031.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
NECEvent2014_8_5_scaffold_919_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8206..10308)
DNA (2103bp) protein (701aa)
Probable TonB-dependent receptor YncD n=87 Tax=Escherichia RepID=YNCD_ECOLI rbh
TonB-dependent siderophore receptor family protein {ECO:0000313|EMBL:KDY15750.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherich
TonB-dependent receptor
NECEvent2014_8_5_scaffold_919_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10550..11353
DNA (804bp) protein (268aa)
Uncharacterized protein YncE n=115 Tax=Escherichia RepID=YNCE_ECOLI
putative receptor
Uncharacterized protein {ECO:0000313|EMBL:KEJ69264.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Displaying 12 items

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