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NECEvent2014_8_5_scaffold_972

Alias: 178_005_scaffold_972

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_972_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1519)
DNA (1518bp) protein (506aa)
malate dehydrogenase (EC:1.1.1.38)
NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619}; Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619};; EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619};; TaxID=1116070 species="Bacteria; Proteoba
NAD-dependent malic enzyme n=167 Tax=Escherichia coli RepID=MAO1_ECO24
NECEvent2014_8_5_scaffold_972_2
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1676..1813)
DNA (138bp) protein (46aa)
Stationary-phase-induced ribosome-associated protein n=1369 Tax=Enterobacteriaceae RepID=SRA_ECO57
rpsV; 30S ribosomal subunit S22
Stationary-phase-induced ribosome-associated protein {ECO:0000313|EMBL:EOV50270.1}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
NECEvent2014_8_5_scaffold_972_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1915..2130)
DNA (216bp) protein (72aa)
Protein bdm n=222 Tax=Escherichia RepID=BDM_ECOLI
biofilm-dependent modulation protein
Biofilm-dependent modulation family protein {ECO:0000313|EMBL:ENB25300.1}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_8_5_scaffold_972_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2475..2906
DNA (432bp) protein (144aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin osmC {ECO:0000313|EMBL:EZJ52188.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EZJ52188.1};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
Peroxiredoxin OsmC n=833 Tax=Enterobacteriaceae RepID=OSMC_ECOLI
NECEvent2014_8_5_scaffold_972_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2962..3888)
DNA (927bp) protein (309aa)
Probable D,D-dipeptide transport ATP-binding protein DdpF n=200 Tax=Escherichia RepID=DDPF_ECOLI rbh
ABC transport system ATP-binding protein
D,D-dipeptide permease system, ATP-binding component {ECO:0000313|EMBL:AJF56316.1}; TaxID=745156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric
NECEvent2014_8_5_scaffold_972_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3881..4867)
DNA (987bp) protein (329aa)
Probable D,D-dipeptide transport ATP-binding protein DdpD n=100 Tax=Escherichia RepID=DDPD_ECOLI rbh
ddpD; putative D,D-dipeptide transport ATP-binding protein ddpD
Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KEJ69180.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
NECEvent2014_8_5_scaffold_972_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4864..5760)
DNA (897bp) protein (299aa)
Probable D,D-dipeptide transport system permease protein DdpC n=120 Tax=Escherichia RepID=DDPC_ECOLI rbh
ddpC; ATP-dependent peptide transporter membrane subunit
Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:KDY15102.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
NECEvent2014_8_5_scaffold_972_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5757..6779)
DNA (1023bp) protein (341aa)
Putative D,D-dipeptide transport system permease protein ddpB n=11 Tax=Escherichia coli RepID=M9CRM7_ECOLX rbh
Putative D,D-dipeptide transport system permease protein ddpB {ECO:0000313|EMBL:KDZ14345.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
D,D-dipeptide transport system permease DdpB
NECEvent2014_8_5_scaffold_972_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6781..8331)
DNA (1551bp) protein (517aa)
Probable D,D-dipeptide-binding periplasmic protein DdpA n=116 Tax=Escherichia RepID=DDPA_ECOLI rbh
ddpA; D-Ala-D-Ala transporter subunit
D-Ala-D-Ala transporter subunit {ECO:0000313|EMBL:EOU67850.1}; TaxID=1169333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_8_5_scaffold_972_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8345..8926)
DNA (582bp) protein (194aa)
D-alanyl-D-alanine dipeptidase (EC:3.4.13.22)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4
D-alanyl-D-alanine dipeptidase n=330 Tax=Enterobacteriaceae RepID=DDPX_ECOLI rbh
NECEvent2014_8_5_scaffold_972_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9184..10872)
DNA (1689bp) protein (563aa)
Oxygen sensor protein DosP {ECO:0000313|EMBL:KEL22198.1}; EC=3.1.4.52 {ECO:0000313|EMBL:KEL22198.1};; TaxID=1444279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobac
Oxygen sensor protein DosP n=1 Tax=Escherichia coli 2722950 RepID=N2F6C8_ECOLX rbh
Heme-regulated cyclic di-GMP, cyclic AMP phosphodiesterase
Displaying 11 items

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