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NECEvent2014_8_5_scaffold_1230

Alias: 178_005_scaffold_1230

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_1230_1
unknown

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comp(1..60)
DNA (60bp) protein (20aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_1230_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(60..1028)
DNA (969bp) protein (323aa)
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase {ECO:0000256|HAMAP-Rule:MF_01164, ECO:0000256|SAAS:SAAS00016541}; EC=2.4.2.53 {ECO:0000256|HAMAP-Rule:MF_01164, ECO:0000256|SAAS:SAAS
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase n=411 Tax=Enterobacteriaceae RepID=ARNC_ECO55 rbh
arnC; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase
NECEvent2014_8_5_scaffold_1230_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1032..2189)
DNA (1158bp) protein (386aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01167, ECO:0000256|SAAS:SAAS00016536}; EC=2.6.1.87 {ECO:0000256|HAMAP-Rule:MF_01167, ECO:0000256|SAAS:SAAS0001
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase n=1 Tax=Escherichia coli UMEA 3052-1 RepID=T8NEX8_ECOLX rbh
UDP-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase
NECEvent2014_8_5_scaffold_1230_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2479..3081
DNA (603bp) protein (201aa)
Lipopolysaccharide core heptose(II)-phosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01868}; EC=3.1.3.- {ECO:0000256|HAMAP-Rule:MF_01868};; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteo
Lipopolysaccharide core heptose(II)-phosphate phosphatase n=152 Tax=Escherichia RepID=AIS_ECOBW rbh
ais; hypothetical protein
NECEvent2014_8_5_scaffold_1230_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3120..3545)
DNA (426bp) protein (142aa)
Nucleoside triphosphatase NudI {ECO:0000256|HAMAP-Rule:MF_01846}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01846};; Pyrimidine deoxynucleoside triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01846
Nucleoside triphosphatase NudI n=177 Tax=Escherichia RepID=NUDI_ECOBW
yfaO; putative NUDIX hydrolase
NECEvent2014_8_5_scaffold_1230_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3824..4366
DNA (543bp) protein (181aa)
Uncharacterized protein YfaZ n=182 Tax=Escherichia RepID=YFAZ_ECOLI rbh
hypothetical protein
YfaZ family protein {ECO:0000313|EMBL:KEO09948.1}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_8_5_scaffold_1230_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4466..5668
DNA (1203bp) protein (401aa)
CinA-like protein n=183 Tax=Escherichia RepID=CINAL_ECOBW rbh
competence damage-inducible protein A
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_8_5_scaffold_1230_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5888..6670
DNA (783bp) protein (261aa)
Uncharacterized HTH-type transcriptional regulator RhmR n=179 Tax=Escherichia RepID=RHMR_ECOLI rbh
yfaX; putative DNA-binding transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KDY64891.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_5_scaffold_1230_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6685..7890
DNA (1206bp) protein (402aa)
L-rhamnonate dehydratase {ECO:0000256|HAMAP-Rule:MF_01288}; Short=RhamD {ECO:0000256|HAMAP-Rule:MF_01288};; EC=4.2.1.90 {ECO:0000256|HAMAP-Rule:MF_01288};; TaxID=1444155 species="Bacteria; Proteobacte
L-rhamnonate dehydratase n=109 Tax=Escherichia RepID=RHMD_ECOBW rbh
mandelate racemase/muconate lactonizing protein
NECEvent2014_8_5_scaffold_1230_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7947..8705
DNA (759bp) protein (253aa)
Inner membrane transport protein RhmT n=6 Tax=Escherichia coli RepID=M8JTE4_ECOLX
major facilitator transporter
Inner membrane transporter YfaV {ECO:0000313|EMBL:EFF06167.2}; TaxID=550676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
Displaying 10 items

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