ggKbase home page

NECEvent2014_8_5_scaffold_1249

Alias: 178_005_scaffold_1249

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_1249_1
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..495
DNA (495bp) protein (165aa)
DNA mismatch repair protein MutS n=1 Tax=Escherichia coli HVH 221 (4-3136817) RepID=T8CH78_ECOLX
DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=766141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
NECEvent2014_8_5_scaffold_1249_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

601..1257
DNA (657bp) protein (219aa)
Serine/threonine-protein phosphatase 2 {ECO:0000313|EMBL:ENB26862.1}; EC=3.1.3.16 {ECO:0000313|EMBL:ENB26862.1};; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriale
Serine/threonine protein phosphatase 2 n=129 Tax=Escherichia RepID=B2N1E2_ECOLX rbh
serine/threonine-specific protein phosphatase 2
NECEvent2014_8_5_scaffold_1249_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1308..2075)
DNA (768bp) protein (256aa)
Uncharacterized HTH-type transcriptional regulator YgbI n=122 Tax=Escherichia RepID=YGBI_ECOLI rbh
ygbI; putative DNA-binding transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EFJ96983.1}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_8_5_scaffold_1249_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2271..3179
DNA (909bp) protein (303aa)
NAD binding domain of 6-phosphogluconate dehydrogenase n=408 Tax=Enterobacteriaceae RepID=A7ZQH6_ECO24 rbh
dehydrogenase
Oxidoreductase {ECO:0000313|EMBL:EZE25848.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:
NECEvent2014_8_5_scaffold_1249_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3176..4342
DNA (1167bp) protein (389aa)
Uncharacterized protein YgbK n=11 Tax=Escherichia coli RepID=YGBK_ECOLI rbh
ygbK; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDU29180.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_5_scaffold_1249_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4434..5072
DNA (639bp) protein (213aa)
Putative aldolase class 2 protein YgbL n=592 Tax=Enterobacteriaceae RepID=YGBL_ECOLI rbh
ygbL; putative aldolase
Aldolase {ECO:0000313|EMBL:EZE25846.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 st
NECEvent2014_8_5_scaffold_1249_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5077..5853
DNA (777bp) protein (259aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
Putative hydroxypyruvate isomerase YgbM n=88 Tax=Escherichia coli RepID=YGBM_ECOLI rbh
putative endonuclease
NECEvent2014_8_5_scaffold_1249_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5942..7306
DNA (1365bp) protein (455aa)
Inner membrane permease YgbN n=95 Tax=Enterobacteriaceae RepID=YGBN_ECOLI rbh
ygbN; inner membrane permease YgbN
Inner membrane permease ygbN {ECO:0000313|EMBL:CEE04003.1}; Predicted transporter {ECO:0000313|EMBL:CDP74170.1}; Putative transporter {ECO:0000313|EMBL:AKF56545.1}; Transporter {ECO:0000313|EMBL:KIG53
NECEvent2014_8_5_scaffold_1249_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7400..8392)
DNA (993bp) protein (331aa)
RNA polymerase sigma factor RpoS n=1 Tax=Escherichia coli HVH 107 (4-5860571) RepID=T6S6W0_ECOLX rbh
rpoS; RNA polymerase sigma factor RpoS
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=1116132 species="Bacteria; Proteobacter
Displaying 9 items

View Taxonomy