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NECEvent2014_8_5_scaffold_1455

Alias: 178_005_scaffold_1455

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_1455_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..825)
DNA (825bp) protein (275aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man
2-dehydro-3-deoxyphosphooctonate aldolase n=1146 Tax=Enterobacteriaceae RepID=KDSA_ECO24 rbh
NECEvent2014_8_5_scaffold_1455_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(861..1670)
DNA (810bp) protein (270aa)
Protein sirB1 n=936 Tax=Enterobacteriaceae RepID=SIRB1_ECO57 rbh
transcriptional regulator
Protein sirB1 {ECO:0000313|EMBL:EOV74316.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.
NECEvent2014_8_5_scaffold_1455_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1674..2066)
DNA (393bp) protein (131aa)
Protein sirB2 n=162 Tax=Escherichia RepID=SIRB2_ECOLI
putative transcriptional regulator
Protein sirB2 {ECO:0000313|EMBL:EHU25455.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;
NECEvent2014_8_5_scaffold_1455_4
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2063..2896)
DNA (834bp) protein (278aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
Release factor glutamine methyltransferase n=258 Tax=Enterobacteriaceae RepID=PRMC_ECOLI rbh
prmC; Protein methyltransferase hemK
NECEvent2014_8_5_scaffold_1455_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2896..3978)
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=1336 Tax=Enterobacteriaceae RepID=RF1_ECO24 rbh
prfA; peptide chain release factor RF-1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
NECEvent2014_8_5_scaffold_1455_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4020..5276)
DNA (1257bp) protein (419aa)
hemA; Glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=405 Tax=Escherichia RepID=HEM1_ECO57 rbh
NECEvent2014_8_5_scaffold_1455_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5490..6113
DNA (624bp) protein (208aa)
Outer-membrane lipoprotein LolB n=903 Tax=Enterobacteriaceae RepID=LOLB_ECO24 rbh
outer membrane lipoprotein LolB
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteria
NECEvent2014_8_5_scaffold_1455_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6113..6964
DNA (852bp) protein (284aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148) rbh
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=352 Tax=Escherichia RepID=ISPE_ECO57 rbh
NECEvent2014_8_5_scaffold_1455_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7049..7186
DNA (138bp) protein (46aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Escherichia coli UMEA 3955-1 RepID=T9VQH9_ECOLX
prsA; ribose-phosphate pyrophosphokinase
Displaying 9 items

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