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NECEvent2014_8_5_scaffold_1516

Alias: 178_005_scaffold_1516

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_1516_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1168
DNA (1167bp) protein (389aa)
L-fuculokinase {ECO:0000256|HAMAP-Rule:MF_00986}; EC=2.7.1.51 {ECO:0000256|HAMAP-Rule:MF_00986};; L-fuculose kinase {ECO:0000256|HAMAP-Rule:MF_00986}; TaxID=562 species="Bacteria; Proteobacteria; Gamm
L-fuculokinase n=1 Tax=Escherichia coli P0305260.5 RepID=N4GJS4_ECOLX rbh
L-fuculokinase
NECEvent2014_8_5_scaffold_1516_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1170..1592
DNA (423bp) protein (141aa)
L-fucose mutarotase {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00010479}; EC=5.1.3.29 {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00148242};; Fucose 1-epimerase {ECO:0000256|HAM
L-fucose mutarotase n=1387 Tax=Enterobacteriaceae RepID=FUCM_ECO24
fucU; fucose operon protein FucU
NECEvent2014_8_5_scaffold_1516_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1650..2381
DNA (732bp) protein (244aa)
L-fucose operon activator n=767 Tax=Enterobacteriaceae RepID=FUCR_ECOLI rbh
DeoR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EZD33730.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_5_scaffold_1516_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2425..3525)
DNA (1101bp) protein (367aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rR
Ribosomal RNA large subunit methyltransferase M n=818 Tax=Enterobacteriaceae RepID=RLMM_ECO24 rbh
ygdE; putative RNA 2'-O-ribose methyltransferase
NECEvent2014_8_5_scaffold_1516_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3518..3913)
DNA (396bp) protein (132aa)
UPF0382 inner membrane protein YgdD n=1299 Tax=Enterobacteriaceae RepID=YGDD_ECO57
ygdD; hypothetical protein
Conserved predicted inner membrane protein {ECO:0000313|EMBL:CAS10622.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_8_5_scaffold_1516_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3932..4849)
DNA (918bp) protein (306aa)
Glycine cleavage system transcriptional activator n=1321 Tax=Enterobacteriaceae RepID=GCVA_ECO57 rbh
gcvA; positive regulator of gcv operon
DNA-binding transcriptional activator GcvA {ECO:0000313|EMBL:AFH12599.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_8_5_scaffold_1516_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5200..5427)
DNA (228bp) protein (76aa)
Uncharacterized protein n=116 Tax=Enterobacteriaceae RepID=D2NLW6_ECOS5
ygdI; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMX83064.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_5_scaffold_1516_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5619..6824
DNA (1206bp) protein (402aa)
Cysteine desulfurase, catalytic subunit CsdA {ECO:0000313|EMBL:ENB11197.1}; EC=2.8.1.7 {ECO:0000313|EMBL:ENB11197.1};; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacte
Cysteine desulfurase CsdA n=225 Tax=Escherichia RepID=CSDA_ECOLI rbh
cysteine sulfinate desulfinase
Displaying 8 items

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