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NECEvent2014_8_5_scaffold_2131

Alias: 178_005_scaffold_2131

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_2131_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..995)
DNA (993bp) protein (331aa)
Putative ABC transporter periplasmic-binding protein YdcS n=1 Tax=Escherichia coli N1 RepID=K3KTX8_ECOLX
ydcS; spermidine/putrescine transporter subunit
Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KDU49926.1}; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escher
NECEvent2014_8_5_scaffold_2131_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1240..2646)
DNA (1407bp) protein (469aa)
Uncharacterized HTH-type transcriptional regulator YdcR n=133 Tax=Escherichia RepID=YDCR_ECOLI rbh
GntR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KDY89701.1}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_5_scaffold_2131_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2725..3162)
DNA (438bp) protein (146aa)
Antitoxin HicB n=1 Tax=Escherichia coli 179100 RepID=N3IWJ9_ECOLX
DNA-binding transcriptional regulator
DNA-binding transcriptional regulator {ECO:0000313|EMBL:AFS74548.1}; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_8_5_scaffold_2131_4

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comp(3187..3363)
DNA (177bp) protein (59aa)
Probable mRNA interferase HicA n=150 Tax=Escherichia RepID=HICA_ECO57
Putative mRNA interferase HicA {ECO:0000313|EMBL:ETJ36105.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hicA; mRNA interferase toxin of the HicAB toxin-antitoxin system
NECEvent2014_8_5_scaffold_2131_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3645..3815
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Escherichia coli RepID=UPI0002B8D52C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD65301.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_5_scaffold_2131_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3907..4692)
DNA (786bp) protein (262aa)
Peptidase, U32 family {ECO:0000313|EMBL:KGM81953.1}; EC=3.4.-.- {ECO:0000313|EMBL:KGM81953.1};; Putative protease YdcP {ECO:0000313|EMBL:KGM69333.1}; EC=3.4.-.- {ECO:0000313|EMBL:KGM69333.1};; TaxID=5
Putative protease YdcP n=1 Tax=Escherichia coli N1 RepID=K3KTX4_ECOLX
peptidase U32
Displaying 6 items

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