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NECEvent2014_8_5_scaffold_618_14

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(9710..10075)

Top 3 Functional Annotations

Value Algorithm Source
Type IV conjugative transfer system pilin TraA n=1 Tax=Escherichia coli H591 RepID=F4V9X5_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 230
  • Evalue 9.20e-58
Type IV conjugative transfer system pilin TraA {ECO:0000313|EMBL:EGI47905.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 230
  • Evalue 1.30e-57
traA; conjugal transfer pilin subunit TraA similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 121.0
  • Bit_score: 222
  • Evalue 5.40e-56

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGGACGCCGTTTTAAGTGTTCAGGGTGCTTCTGCGCCCGTCAAAAAGAAATCGTTTTTTTCTAAATTCACTCGTCTGAATATGCTTCGCCTGGTTCGCGCTGTGATCCCGGCGGCTGTTCTGATGATGTTCTTCCCGCAACTGGCGATGGCTGCCGGTGGTGCCGGTCAGGACCTGATGGCAAGTGGTAACAACACGGTTAAGGCGACCTTCGGTAAGGACTCCAGTATTGTTAAATGGGTTGTTCTGGCTGAAGTCCTGGTCGGTGCGGTCATGTACATGATGACCAAAAACGTCAAGTTCCTGGCCGGTTTTGCCATCATCTCTGTATTTATTGCTGTGGGTATGGCCGTCGTTGGCCTCTGA
PROTEIN sequence
Length: 122
MDAVLSVQGASAPVKKKSFFSKFTRLNMLRLVRAVIPAAVLMMFFPQLAMAAGGAGQDLMASGNNTVKATFGKDSSIVKWVVLAEVLVGAVMYMMTKNVKFLAGFAIISVFIAVGMAVVGL*