ggKbase home page

NECEvent2014_8_5_scaffold_618

Alias: 178_005_scaffold_618

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_618_1
unknown

Not on your lists

comp(138..554)
DNA (417bp) protein (139aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_618_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(577..3222)
DNA (2646bp) protein (882aa)
TraC n=1 Tax=Escherichia coli RepID=Q5JBN2_ECOLX rbh
Conjugal transfer protein TraC {ECO:0000313|EMBL:KIH07686.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
traC; conjugative transfer protein
NECEvent2014_8_5_scaffold_618_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3348..3710)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Escherichia coli AD30 RepID=K5BLJ6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EKJ80572.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_8_5_scaffold_618_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3738..3953)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 197 (4-4466217) RepID=T7U6V6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KJH05004.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.
hypothetical protein
NECEvent2014_8_5_scaffold_618_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4033..4506)
DNA (474bp) protein (158aa)
Uncharacterized protein n=5 Tax=Enterobacteriaceae RepID=Q5JBM9_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:AAW58901.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.
hypothetical protein
NECEvent2014_8_5_scaffold_618_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4499..4912)
DNA (414bp) protein (138aa)
YfhA n=6 Tax=Escherichia coli RepID=I5EMR5_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EYZ95649.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_8_5_scaffold_618_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5261..5776)
DNA (516bp) protein (172aa)
Type IV conjugative transfer system protein TraV n=2 Tax=Escherichia coli RepID=F4V9W8_ECOLX rbh
Type IV conjugative transfer system protein TraV {ECO:0000313|EMBL:EGI47898.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
conjugal transfer protein TraV
NECEvent2014_8_5_scaffold_618_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5776..6141)
DNA (366bp) protein (122aa)
TrbD n=17 Tax=Bacteria RepID=D4HR12_KLEPN
Conserved domain protein {ECO:0000313|EMBL:EGI47899.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
trbD; IncF plasmid conjugative transfer protein TrbD
NECEvent2014_8_5_scaffold_618_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6080..6667)
DNA (588bp) protein (196aa)
Protein TraP n=2 Tax=Escherichia coli RepID=F4V9X0_ECOLX rbh
Protein TraP {ECO:0000313|EMBL:EGI47900.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
traP; conjugal transfer protein TraP
NECEvent2014_8_5_scaffold_618_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6654..8081)
DNA (1428bp) protein (476aa)
Protein TraB n=1 Tax=Escherichia coli H591 RepID=F4V9X1_ECOLX rbh
Protein TraB {ECO:0000313|EMBL:EGI47901.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
conjugal transfer pilus assembly protein TraB
NECEvent2014_8_5_scaffold_618_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8081..8809)
DNA (729bp) protein (243aa)
Type-F conjugative transfer system secretin TraK n=9 Tax=Escherichia coli RepID=H4XF02_ECOLX rbh
Type-F conjugative transfer system secretin TraK {ECO:0000313|EMBL:KDU24498.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
traK; conjugal transfer protein TraK
NECEvent2014_8_5_scaffold_618_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8796..9362)
DNA (567bp) protein (189aa)
TraE protein n=24 Tax=Bacteria RepID=Q08JH0_ECOLX rbh
traE; conjugative transfer protein
Type IV conjugative transfer system protein TraE {ECO:0000313|EMBL:KEO23538.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_8_5_scaffold_618_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9384..9695)
DNA (312bp) protein (104aa)
Type IV conjugative transfer system protein TraL n=4 Tax=Escherichia coli RepID=H4Y5H5_ECOLX
Type IV conjugative transfer system protein TraL {ECO:0000313|EMBL:KEL20210.1}; TaxID=1444279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
traL; conjugal transfer pilus assembly protein TraL
NECEvent2014_8_5_scaffold_618_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9710..10075)
DNA (366bp) protein (122aa)
Type IV conjugative transfer system pilin TraA n=1 Tax=Escherichia coli H591 RepID=F4V9X5_ECOLX
Type IV conjugative transfer system pilin TraA {ECO:0000313|EMBL:EGI47905.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
traA; conjugal transfer pilin subunit TraA
NECEvent2014_8_5_scaffold_618_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10109..10336)
DNA (228bp) protein (76aa)
Conjugal transfer protein TraY n=1 Tax=Escherichia coli KTE48 RepID=L4C833_ECOLX
Conjugal transfer protein TraY {ECO:0000313|EMBL:KFD73792.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
conjugal transfer protein TraY
NECEvent2014_8_5_scaffold_618_16
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10455..11102)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE48 RepID=L4C803_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:CDZ86550.1}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koser
conjugal transfer transcriptional regulator TraJ
NECEvent2014_8_5_scaffold_618_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11296..11679)
DNA (384bp) protein (128aa)
Type IV secretion-like conjugative transfer system protein TraM n=2 Tax=Escherichia coli RepID=B2U5S4_ECOLX
Type IV secretion-like conjugative transfer system protein TraM {ECO:0000313|EMBL:ACD54419.1}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriacea
traM; TraM protein
NECEvent2014_8_5_scaffold_618_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12093..12602
DNA (510bp) protein (170aa)
Lytic transglycosylase n=14 Tax=Escherichia coli RepID=I4QBI2_ECOLX rbh
lytic transglycosylase rbh
Lytic transglycosylase {ECO:0000313|EMBL:EYV03984.1}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_5_scaffold_618_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12899..13720)
DNA (822bp) protein (274aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=M9BGM2_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:EMX29913.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_8_5_scaffold_618_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13826..14122)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3200-1 RepID=T8ZPJ7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQX80628.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_8_5_scaffold_618_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14366..15376
DNA (1011bp) protein (337aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=U0BLK8_ECOLX rbh
Putative transposase {ECO:0000313|EMBL:EGI42923.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
putative invertase
NECEvent2014_8_5_scaffold_618_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15470..15712)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli RN587/1 RepID=E7JEE1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOW89440.1}; Flags: Fragment;; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
hypothetical protein
Displaying 22 items

View Taxonomy