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NECEvent2014_8_5_scaffold_883_7

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(6339..6818)

Top 3 Functional Annotations

Value Algorithm Source
Protein RseC n=241 Tax=Escherichia RepID=RSEC_ECOLI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 316
  • Evalue 2.20e-83
  • rbh
rseC; SoxR reducing system protein RseC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 316
  • Evalue 6.10e-84
Sigma-E factor regulatory protein RseC {ECO:0000313|EMBL:EFU36565.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 316
  • Evalue 3.10e-83

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGATCAAAGAGTGGGCTACCGTCGTCTCCTGGCAAAACGGGCAGGCGCTGGTCAGTTGTGATGTTAAAGCTTCATGCAGCAGCTGCGCTTCACGCGCCGGTTGCGGTAGCCGCGTGTTAAATAAACTTGGCCCGCAAACCACGCATACCATTGTCGTACCCTGTGATGAGCCGTTAGTGCCGGGGCAAAAAGTGGAATTGGGGATCGCCGAAGGCAGCCTGCTTAGCTCCGCATTACTGGTTTATATGTCGCCGCTGGTGGGATTATTCCTTATCGCTTCGCTATTTCAGCTACTCTTTGCTTCTGACGTCGCAGCATTATGTGGTGCGATCCTCGGTGGTATTGGCGGGTTCCTGATTGCGCGCGGCTACTCGCGTAAGTTTGCTGCCCGGGCAGAATGGCAACCGATCATCTTAAGCGTGGCATTGCCGCCTGGCCTTGTGCGATTTGAAACATCTTCGGAAGACGCGAGCCAGTGA
PROTEIN sequence
Length: 160
MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTIVVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFASDVAALCGAILGGIGGFLIARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ*