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NECEvent2014_8_5_scaffold_883

Alias: 178_005_scaffold_883

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_883_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15..746)
DNA (732bp) protein (244aa)
pdxJ; Pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
Pyridoxine 5'-phosphate synthase n=729 Tax=Escherichia RepID=PDXJ_ECO57 rbh
NECEvent2014_8_5_scaffold_883_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(758..1486)
DNA (729bp) protein (243aa)
DNA repair protein RecO n=768 Tax=Bacteria RepID=RECO_ECO45 rbh
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1001989 species="Bacteria; Proteobacteria; Ga
NECEvent2014_8_5_scaffold_883_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1498..2403)
DNA (906bp) protein (302aa)
GTPase Era n=258 Tax=Enterobacteriaceae RepID=ERA_ECOBW rbh
era; GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_8_5_scaffold_883_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2400..3080)
DNA (681bp) protein (227aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
Ribonuclease 3 n=1213 Tax=Enterobacteriaceae RepID=RNC_ECO24 rbh
NECEvent2014_8_5_scaffold_883_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3352..4326)
DNA (975bp) protein (325aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=868161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
Signal peptidase I n=161 Tax=Enterobacteriaceae RepID=LEP_ECOLI rbh
lepB; signal peptidase I
NECEvent2014_8_5_scaffold_883_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4342..6141)
DNA (1800bp) protein (600aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1105 Tax=Enterobacteriaceae RepID=LEPA_ECO24 rbh
lepA; GTP-binding protein LepA
NECEvent2014_8_5_scaffold_883_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6339..6818)
DNA (480bp) protein (160aa)
Protein RseC n=241 Tax=Escherichia RepID=RSEC_ECOLI rbh
rseC; SoxR reducing system protein RseC
Sigma-E factor regulatory protein RseC {ECO:0000313|EMBL:EFU36565.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_8_5_scaffold_883_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6815..7771)
DNA (957bp) protein (319aa)
Sigma-E factor regulatory protein RseB n=890 Tax=Bacteria RepID=RSEB_ECO57 rbh
sigma E regulatory protein MucB/RseB
Sigma-E factor regulatory protein rseB {ECO:0000313|EMBL:EOU91301.1}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_8_5_scaffold_883_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7771..8421)
DNA (651bp) protein (217aa)
Anti-sigma-E factor RseA n=938 Tax=Enterobacteriaceae RepID=RSEA_ECOL6 rbh
rseA; anti-RNA polymerase sigma factor SigE
Anti-sigma-E factor RseA {ECO:0000256|PIRNR:PIRNR016938}; Regulator of SigE {ECO:0000256|PIRNR:PIRNR016938}; Sigma-E anti-sigma factor RseA {ECO:0000256|PIRNR:PIRNR016938}; Sigma-E factor negative reg
NECEvent2014_8_5_scaffold_883_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8454..9029)
DNA (576bp) protein (192aa)
ECF RNA polymerase sigma-E factor n=1376 Tax=Enterobacteriaceae RepID=RPOE_ECO57 rbh
rpoE; RNA polymerase, sigma 24 (sigma E) factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_8_5_scaffold_883_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9437..11059
DNA (1623bp) protein (541aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1169333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
L-aspartate oxidase n=85 Tax=Escherichia RepID=NADB_ECOLI rbh
nadB; L-aspartate oxidase
NECEvent2014_8_5_scaffold_883_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11044..11772)
DNA (729bp) protein (243aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=4 Tax=Escherichia coli RepID=D6ISU7_ECOLX rbh
methyltransferase small
Displaying 12 items

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