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NECEvent2014_8_5_scaffold_957

Alias: 178_005_scaffold_957

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_957_1
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1858)
DNA (1857bp) protein (619aa)
Site-specific recombinases, DNA invertase Pin homologs n=24 Tax=root RepID=D4L0X6_9FIRM rbh
Site-specific recombinases, DNA invertase Pin homologs
TnpX site-specific recombinase {ECO:0000313|EMBL:EEX20396.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
NECEvent2014_8_5_scaffold_957_2
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1913..2176)
DNA (264bp) protein (88aa)
Uncharacterized protein n=35 Tax=root RepID=A5ZNP1_9FIRM
hypothetical protein
Stage II sporulation protein R {ECO:0000313|EMBL:ESV55826.1}; TaxID=1154860 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae
NECEvent2014_8_5_scaffold_957_3
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2176..2406)
DNA (231bp) protein (77aa)
Uncharacterized protein conserved in bacteria n=31 Tax=root RepID=D4L0X4_9FIRM
hypothetical protein
Seryl-tRNA synthetase {ECO:0000313|EMBL:ESV55827.1}; TaxID=1154860 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae LMG 1474
NECEvent2014_8_5_scaffold_957_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2452..3306)
DNA (855bp) protein (285aa)
ParB-like partition proteins n=26 Tax=root RepID=D4L0X3_9FIRM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD26067.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.
NECEvent2014_8_5_scaffold_957_5
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3315..4280)
DNA (966bp) protein (322aa)
Plasmid recombination enzyme n=29 Tax=root RepID=D4L0X2_9FIRM rbh
hypothetical protein
Plasmid recombination enzyme {ECO:0000313|EMBL:EDM88490.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
NECEvent2014_8_5_scaffold_957_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4805..5830)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=23 Tax=root RepID=A7VZ31_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ETD26065.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.
hypothetical protein rbh
NECEvent2014_8_5_scaffold_957_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6136..6591
DNA (456bp) protein (152aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=R3E2J1_ENTFL rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDR99462.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15
NECEvent2014_8_5_scaffold_957_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6543..6968)
DNA (426bp) protein (142aa)
Sigma-70, region 4 n=35 Tax=root RepID=V6W360_STRPY
hypothetical protein
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDM61982.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena D
NECEvent2014_8_5_scaffold_957_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7063..7575)
DNA (513bp) protein (171aa)
Sigma-70 region 4 domain protein n=36 Tax=Bacteria RepID=D9SLI1_CLOC7 rbh
DNA-directed RNA polymerase specialized sigma subunit
Uncharacterized protein {ECO:0000313|EMBL:ETD26062.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.
NECEvent2014_8_5_scaffold_957_10
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8063..8236)
DNA (174bp) protein (58aa)
Cpp2 n=19 Tax=root RepID=E6RWW3_CAMJS
cpp2
Uncharacterized protein {ECO:0000313|EMBL:EFV16580.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
NECEvent2014_8_5_scaffold_957_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8288..10207)
DNA (1920bp) protein (640aa)
Tetracycline resistance protein n=25 Tax=Bacteria RepID=F0YZ45_9CLOT rbh
tetracycline resistance protein Tet
Tetracycline resistance protein tetO {ECO:0000313|EMBL:ETD26061.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactar
NECEvent2014_8_5_scaffold_957_12
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10574..10948)
DNA (375bp) protein (125aa)
Uncharacterized protein n=45 Tax=root RepID=D6ZFX3_MOBCV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDR97109.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
NECEvent2014_8_5_scaffold_957_13
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10929..11006)
DNA (78bp) protein (26aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MM80_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDO59801.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostrid
SNF2-related protein
Displaying 13 items

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