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NECEvent2014_8_5_scaffold_993

Alias: 178_005_scaffold_993

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_993_1
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..131
DNA (129bp) protein (43aa)
DNA-directed DNA polymerase III subunit epsilon n=1 Tax=Anaerococcus obesiensis RepID=UPI0002FCF75C
DEAD2 domain protein {ECO:0000313|EMBL:EEU12946.1}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus vaginalis ATCC 51170.;
DEAD/DEAH box helicase
NECEvent2014_8_5_scaffold_993_2
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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132..1499
DNA (1368bp) protein (456aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EEU12947.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEU12947.1};; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphil
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HTJ7_9FIRM rbh
TrmA family RNA methyltransferase
NECEvent2014_8_5_scaffold_993_3
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1735..2655
DNA (921bp) protein (307aa)
Recombinase n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MTP9_9FIRM rbh
Recombinase {ECO:0000313|EMBL:EGS29727.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436
site-specific recombinase, DNA invertase Pin
NECEvent2014_8_5_scaffold_993_4
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2703..3476
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MTQ0_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGS31651.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral
hypothetical protein
NECEvent2014_8_5_scaffold_993_5
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4222..4425)
DNA (204bp) protein (68aa)
Transcriptional regulator n=1 Tax=Corynebacterium diphtheriae (strain HC02) RepID=H2HGU5_CORDJ
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EPI61377.1}; TaxID=1261064 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP8066.;"
NECEvent2014_8_5_scaffold_993_6
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4422..6068)
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Gardnerella vaginalis JCP8066 RepID=S4HDL2_GARVA rbh
Uncharacterized protein {ECO:0000313|EMBL:EPI61376.1}; TaxID=1261064 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP8066.;"
chromosome segregation ATPase
NECEvent2014_8_5_scaffold_993_7
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6062..6280)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Gardnerella vaginalis JCP8066 RepID=S4HVG9_GARVA
Uncharacterized protein {ECO:0000313|EMBL:EPI61375.1}; TaxID=1261064 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP8066.;"
hypothetical protein
NECEvent2014_8_5_scaffold_993_8
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6267..7424)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Actinobaculum urinale RepID=UPI0003B424D6 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPI61374.1}; TaxID=1261064 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP8066.;"
hypothetical protein
NECEvent2014_8_5_scaffold_993_9
Peptostreptococcus stomatis, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7828..8415
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Anaerococcus obesiensis RepID=UPI00037D6239 rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EFM64481.1}; TaxID=596315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="
hypothetical protein
NECEvent2014_8_5_scaffold_993_10
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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8459..8752
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Anaerococcus obesiensis RepID=UPI0002EF266F
Uncharacterised protein {ECO:0000313|EMBL:CRH68638.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;
hypothetical protein
NECEvent2014_8_5_scaffold_993_11
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8694..8984
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MTQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF08585.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
hypothetical protein
NECEvent2014_8_5_scaffold_993_12
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8984..10108
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MTQ5_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGS29787.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral
hypothetical protein
NECEvent2014_8_5_scaffold_993_13
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10098..10640
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MTQ6_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGS30304.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral
hypothetical protein
Displaying 13 items

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