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NECEvent2014_8_6_scaffold_270

Alias: 178_006_scaffold_270

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_270_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..674)
DNA (672bp) protein (224aa)
Sporulation integral membrane protein YlbJ n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHZ0_CLOBU rbh
Membrane protein {ECO:0000313|EMBL:KJZ82935.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ylbJ; sporulation integral membrane protein YlbJ
NECEvent2014_8_6_scaffold_270_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(789..1868)
DNA (1080bp) protein (360aa)
UPF0348 protein HMPREF1084_00572 n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AT97_CLOBU rbh
UPF0348 protein ClosIBUN13A_CONTIG83g01146 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
nucleotidyltransferase
NECEvent2014_8_6_scaffold_270_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2290..3291
DNA (1002bp) protein (334aa)
pta; phosphate acetyltransferase Pta (EC:2.3.1.8)
Phosphate acetyltransferase n=4 Tax=Clostridium butyricum RepID=B1QU25_CLOBU rbh
Phosphate acetyltransferase {ECO:0000313|EMBL:ETI91333.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;
NECEvent2014_8_6_scaffold_270_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3330..4526
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia;
ackA; acetate kinase AckA (EC:2.7.2.1)
Acetate kinase n=3 Tax=Clostridium butyricum RepID=B1QU26_CLOBU rbh
NECEvent2014_8_6_scaffold_270_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4670..5176
DNA (507bp) protein (169aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QU27_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP54297.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_8_6_scaffold_270_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5180..5362
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=4 Tax=Clostridium butyricum RepID=B1QU28_CLOBU
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;
rpmF; 50S ribosomal protein L32
NECEvent2014_8_6_scaffold_270_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5718..6719
DNA (1002bp) protein (334aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
plsX; phosphate acyltransferase PlsX (EC:2.3.1.n2)
Phosphate acyltransferase n=4 Tax=Clostridium butyricum RepID=B1QU29_CLOBU rbh
NECEvent2014_8_6_scaffold_270_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6785..7015
DNA (231bp) protein (77aa)
Acyl carrier protein n=4 Tax=Clostridium butyricum RepID=B1QU30_CLOBU
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridial
acpP2; acyl carrier protein AcpP
NECEvent2014_8_6_scaffold_270_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7115..7813
DNA (699bp) protein (233aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:00
rnc; ribonuclease 3 (EC:3.1.26.3)
Ribonuclease 3 n=4 Tax=Clostridium butyricum RepID=B1QU31_CLOBU rbh
NECEvent2014_8_6_scaffold_270_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7806..8900
DNA (1095bp) protein (365aa)
Radical SAM domain protein n=2 Tax=Clostridium butyricum RepID=B1QU32_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84544.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
radical SAM domain-containing protein
NECEvent2014_8_6_scaffold_270_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9096..12659
DNA (3564bp) protein (1188aa)
Chromosome partition protein Smc n=1 Tax=Clostridium butyricum 5521 RepID=B1QU33_CLOBU rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN1
smc; chromosome partition protein Smc
NECEvent2014_8_6_scaffold_270_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12861..13784
DNA (924bp) protein (308aa)
UPI0003D65A31 related cluster n=1 Tax=unknown RepID=UPI0003D65A31 rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridial
ftsY; signal recognition particle receptor FtsY
NECEvent2014_8_6_scaffold_270_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13993..14322
DNA (330bp) protein (110aa)
UPF0122 protein CBY_0215 n=4 Tax=Clostridium butyricum RepID=B1QU35_CLOBU
UPF0122 protein HMPREF1084_00583 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
hypothetical protein
NECEvent2014_8_6_scaffold_270_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14336..15694
DNA (1359bp) protein (453aa)
Signal recognition particle protein n=4 Tax=Clostridium butyricum RepID=B1QU36_CLOBU rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
ffh; signal recognition particle protein Ffh rbh
NECEvent2014_8_6_scaffold_270_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15737..15982
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=4 Tax=Clostridium butyricum RepID=B1QU37_CLOBU
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1
rpsP; 30S ribosomal protein S16
NECEvent2014_8_6_scaffold_270_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16031..16258
DNA (228bp) protein (76aa)
UPF0109 protein CBY_0218 n=4 Tax=Clostridium butyricum RepID=B1QU38_CLOBU
UPF0109 protein HMPREF1084_00586 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
hypothetical protein
Displaying 16 items

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